RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 CNTN1Q12860 1018 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 NFATC4Q14934 902 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 SPATS1Q496A3 300 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 FAM74A3Q4VXF1 159 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 PRAMEF5Q5TYX0 476 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 PRAMEF6Q5VXH4 476 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 OR2A2Q6IF42 318 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 NEPROQ6NW34 567 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 STEAP1BQ6NZ63 245 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 PARM1Q6UWI2 310 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 NIPA1Q7RTP0 329 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 COX8CQ7Z4L0 72 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 CLIP4Q8N3C7 705 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 CHDHQ8NE62 594 aaPredicted RBP2.37□□□□□ -2.03
XRN1-210ENST00000472697 OR1L4Q8NGR5 311 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 OR1J1Q8NGS3 322 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 OR4C3Q8NH37 302 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 FAM122AQ96E09 287 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 TMEM19Q96HH6 336 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 HPDLQ96IR7 371 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 CNOT6LQ96LI5 555 aaKnown RBP2.37□□□□□ -2.03
XRN1-210ENST00000472697 FMO2Q99518 471 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 SIKE1Q9BRV8 207 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 TEKT3Q9BXF9 490 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 ATG10Q9H0Y0 220 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 FBXO44Q9H4M3 255 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 DHX33Q9H6R0 707 aaKnown RBP2.37□□□□□ -2.03
XRN1-210ENST00000472697 SDR39U1Q9NRG7 319 aaPredicted RBP2.37□□□□□ -2.03
XRN1-210ENST00000472697 FAM114A2Q9NRY5 505 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 SMPD4Q9NXE4 827 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 RNF186Q9NXI6 227 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 ZNF175Q9Y473 711 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 ZMYM2Q9UBW7 1377 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 ARID2Q68CP9 1835 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 M0QX08 132 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 HAS3O00219 553 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 UPK3AO75631 287 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 RFPL2O75678 378 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 TGM6O95932 706 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 LDLRP01130 860 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 NGFP01138 241 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 RAF1P04049 648 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 H1F0P07305 194 aaKnown RBP2.36□□□□□ -2.03
XRN1-210ENST00000472697 ZNF12P17014 697 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 ACKR3P25106 362 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 NMT1P30419 496 aaKnown RBP2.36□□□□□ -2.03
XRN1-210ENST00000472697 SFTPDP35247 375 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 ZP1P60852 638 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 RPL27P61353 136 aaKnown RBP2.36□□□□□ -2.03
XRN1-210ENST00000472697 GPR50Q13585 617 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 DAZAP2Q15038 168 aaPredicted RBP2.36□□□□□ -2.03
XRN1-210ENST00000472697 ZNF74Q16587 644 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 CDKN3Q16667 212 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 HKDC1Q2TB90 917 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 HSP90AA4PQ58FG1 418 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 TMEM220Q6QAJ8 160 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 SHC4Q6S5L8 630 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 ANGPTL8Q6UXH0 198 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 TRMT11Q7Z4G4 463 aaKnown RBP2.36□□□□□ -2.03
XRN1-210ENST00000472697 GPR141Q7Z602 305 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 PIP4P1Q86T03 277 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 KCNMB4Q86W47 210 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 OR9K2Q8NGE7 335 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 OR6M1Q8NGM8 313 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 OR13C5Q8NGS8 318 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 SCFD1Q8WVM8 642 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 HSD17B8Q92506 261 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 FAM3CQ92520 227 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 TM4SF19Q96DZ7 209 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 ZNF333Q96JL9 665 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 IFT74Q96LB3 600 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 C4orf45Q96LM5 186 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 GUCD1Q96NT3 240 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 VPS35Q96QK1 796 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 TIMP4Q99727 224 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 WRAP53Q9BUR4 548 aaKnown RBP2.36□□□□□ -2.03
XRN1-210ENST00000472697 NUP58Q9BVL2 599 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 THAP2Q9H0W7 228 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 EGLN3Q9H6Z9 239 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 STK26Q9P289 416 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 RNF24Q9Y225 148 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 DMRT1Q9Y5R6 373 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 AFDNP55196 1824 aaKnown RBP2.36□□□□□ -2.03
XRN1-210ENST00000472697 CASP8AP2Q9UKL3 1982 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 TRBV5-5A0A0J9YX44 114 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 PRSS37A4D1T9 235 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 LRP5LA4QPB2 252 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.36□□□□□ -2.03
XRN1-210ENST00000472697 NPIPA3F8WFD2 350 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 CASKO14936 926 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 STX7O15400 261 aaKnown RBP2.36□□□□□ -2.03
XRN1-210ENST00000472697 NBR2O15453 112 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 LRRTM2O43300 516 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 FCMRO60667 390 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 BCAS1O75363 584 aaPredicted RBP2.36□□□□□ -2.03
XRN1-210ENST00000472697 ANXA4P09525 319 aaPredicted RBP2.36□□□□□ -2.03
XRN1-210ENST00000472697 CCDC159P0C7I6 412 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 LINC00271P0C7V0 271 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 FAM106CPP0CH98 169 aa2.36□□□□□ -2.03
XRN1-210ENST00000472697 GM2AP17900 193 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms