RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 Q9UF83 564 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 STRAPQ9Y3F4 350 aaKnown RBP4.2□□□□□ -1.74
CLK1-209ENST00000472679 TRIM64A6NGJ6 449 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 TRIM64BA6NI03 449 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 EI24O14681 340 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 PDE5AO76074 875 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 KRTAP1-4P0C5Y4 121 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 ZCCHC18P0CG32 403 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 CYP11B1P15538 503 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 GNSP15586 552 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 KLK2P20151 261 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 CHRNA3P32297 505 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 NT5C2P49902 561 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 SGSHP51688 502 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 PAX2Q02962 417 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 SHROOM1Q2M3G4 852 aaPredicted RBP4.19□□□□□ -1.74
CLK1-209ENST00000472679 ETFRF1Q6IPR1 90 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 CGB2Q6NT52 195 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 ATRAIDQ6UW56 229 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 RABEPKQ7Z6M1 372 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 C11orf53Q8IXP5 236 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 MGARPQ8TDB4 240 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 COQ7Q99807 217 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 CBWD1Q9BRT8 395 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 APOOQ9BUR5 198 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 SLITRK2Q9H156 845 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 ALG9Q9H6U8 611 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 CENPMQ9NSP4 180 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 RAI14Q9P0K7 980 aa4.19□□□□□ -1.74
CLK1-209ENST00000472679 FAM168BA1KXE4 195 aa4.18□□□□□ -1.74
CLK1-209ENST00000472679 SYCE3A1L190 88 aa4.18□□□□□ -1.74
CLK1-209ENST00000472679 BCAS2O75934 225 aaPredicted RBP4.18□□□□□ -1.74
CLK1-209ENST00000472679 ECDO95905 644 aaPredicted RBP4.18□□□□□ -1.74
CLK1-209ENST00000472679 PTPN4P29074 926 aa4.18□□□□□ -1.74
CLK1-209ENST00000472679 BTG3Q14201 252 aaPredicted RBP4.18□□□□□ -1.74
CLK1-209ENST00000472679 CARTPTQ16568 116 aa4.18□□□□□ -1.74
CLK1-209ENST00000472679 ZNF699Q32M78 642 aa4.18□□□□□ -1.74
CLK1-209ENST00000472679 UTF1Q5T230 341 aa4.18□□□□□ -1.74
CLK1-209ENST00000472679 MARC1Q5VT66 337 aa4.18□□□□□ -1.74
CLK1-209ENST00000472679 PAMR1Q6UXH9 720 aa4.18□□□□□ -1.74
CLK1-209ENST00000472679 DPY19L2P2Q6ZN68 376 aa4.18□□□□□ -1.74
CLK1-209ENST00000472679 AMZ2Q86W34 360 aa4.18□□□□□ -1.74
CLK1-209ENST00000472679 ZBED8Q8IZ13 594 aa4.18□□□□□ -1.74
CLK1-209ENST00000472679 LRRC17Q8N6Y2 441 aa4.18□□□□□ -1.74
CLK1-209ENST00000472679 MLKLQ8NB16 471 aa4.18□□□□□ -1.74
CLK1-209ENST00000472679 LHX4Q969G2 390 aa4.18□□□□□ -1.74
CLK1-209ENST00000472679 TRIM9Q9C026 710 aa4.18□□□□□ -1.74
CLK1-209ENST00000472679 TSPY26PQ9H489 355 aa4.18□□□□□ -1.74
CLK1-209ENST00000472679 THAP9Q9H5L6 903 aa4.18□□□□□ -1.74
CLK1-209ENST00000472679 DNPEPQ9ULA0 475 aa4.18□□□□□ -1.74
CLK1-209ENST00000472679 RNF115Q9Y4L5 304 aa4.18□□□□□ -1.74
CLK1-209ENST00000472679 CROCCQ5TZA2 2017 aa4.17□□□□□ -1.74
CLK1-209ENST00000472679 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.17□□□□□ -1.74
CLK1-209ENST00000472679 TYROBPO43914 113 aa4.17□□□□□ -1.74
CLK1-209ENST00000472679 SNRPCP09234 159 aaKnown RBP4.17□□□□□ -1.74
CLK1-209ENST00000472679 LAMP1P11279 417 aa4.17□□□□□ -1.74
CLK1-209ENST00000472679 PVRP15151 417 aa4.17□□□□□ -1.74
CLK1-209ENST00000472679 IDSP22304 550 aa4.17□□□□□ -1.74
CLK1-209ENST00000472679 AHCYP23526 432 aa4.17□□□□□ -1.74
CLK1-209ENST00000472679 ACP1P24666 158 aa4.17□□□□□ -1.74
CLK1-209ENST00000472679 POU3F4P49335 361 aa4.17□□□□□ -1.74
CLK1-209ENST00000472679 CASP9P55211 416 aa4.17□□□□□ -1.74
CLK1-209ENST00000472679 SSTP61278 116 aa4.17□□□□□ -1.74
CLK1-209ENST00000472679 PPIAP62937 165 aaKnown RBP4.17□□□□□ -1.74
CLK1-209ENST00000472679 CXCL6P80162 114 aa4.17□□□□□ -1.74
CLK1-209ENST00000472679 SLC10A1Q14973 349 aa4.17□□□□□ -1.74
CLK1-209ENST00000472679 MICAQ29983 383 aa4.17□□□□□ -1.74
CLK1-209ENST00000472679 AGKQ53H12 422 aa4.17□□□□□ -1.74
CLK1-209ENST00000472679 CWC27Q6UX04 472 aaKnown RBP4.17□□□□□ -1.74
CLK1-209ENST00000472679 GCNT7Q6ZNI0 430 aa4.17□□□□□ -1.74
CLK1-209ENST00000472679 COLGALT1Q8NBJ5 622 aa4.17□□□□□ -1.74
CLK1-209ENST00000472679 ZNF397Q8NF99 534 aaPredicted RBP4.17□□□□□ -1.74
CLK1-209ENST00000472679 PHYHIPQ92561 330 aa4.17□□□□□ -1.74
CLK1-209ENST00000472679 TIGARQ9NQ88 270 aa4.17□□□□□ -1.74
CLK1-209ENST00000472679 RPH3AQ9Y2J0 694 aaPredicted RBP4.17□□□□□ -1.74
CLK1-209ENST00000472679 NPIPA5A0A0B4J1W7 369 aa4.16□□□□□ -1.74
CLK1-209ENST00000472679 A0A0J9YVX5 310 aa4.16□□□□□ -1.74
CLK1-209ENST00000472679 SLC9B1P1A6NJY1 282 aa4.16□□□□□ -1.74
CLK1-209ENST00000472679 EFCAB7A8K855 629 aa4.16□□□□□ -1.74
CLK1-209ENST00000472679 NPIPA5E9PKD4 350 aa4.16□□□□□ -1.74
CLK1-209ENST00000472679 CFLARO15519 480 aa4.16□□□□□ -1.74
CLK1-209ENST00000472679 ADAM12O43184 909 aa4.16□□□□□ -1.74
CLK1-209ENST00000472679 PRAMEF12O95522 483 aa4.16□□□□□ -1.74
CLK1-209ENST00000472679 PROS1P07225 676 aa4.16□□□□□ -1.74
CLK1-209ENST00000472679 TMOD1P28289 359 aa4.16□□□□□ -1.74
CLK1-209ENST00000472679 WDR88Q6ZMY6 472 aa4.16□□□□□ -1.74
CLK1-209ENST00000472679 BATF2Q8N1L9 274 aa4.16□□□□□ -1.74
CLK1-209ENST00000472679 LEMD2Q8NC56 503 aa4.16□□□□□ -1.74
CLK1-209ENST00000472679 OR52J3Q8NH60 311 aa4.16□□□□□ -1.74
CLK1-209ENST00000472679 VN1R17PQ8TDU5 208 aa4.16□□□□□ -1.74
CLK1-209ENST00000472679 DLX4Q92988 240 aaPredicted RBP4.16□□□□□ -1.74
CLK1-209ENST00000472679 SERAC1Q96JX3 654 aa4.16□□□□□ -1.74
CLK1-209ENST00000472679 CCT8L2Q96SF2 557 aa4.16□□□□□ -1.74
CLK1-209ENST00000472679 RSPH9Q9H1X1 276 aaPredicted RBP4.16□□□□□ -1.74
CLK1-209ENST00000472679 SYTL2Q9HCH5 934 aa4.16□□□□□ -1.74
CLK1-209ENST00000472679 IMPAD1Q9NX62 359 aa4.16□□□□□ -1.74
CLK1-209ENST00000472679 PURGQ9UJV8 347 aaKnown RBP4.16□□□□□ -1.74
CLK1-209ENST00000472679 MFSD2BA6NFX1 497 aa4.15□□□□□ -1.75
CLK1-209ENST00000472679 H3BMH7 237 aa4.15□□□□□ -1.75
CLK1-209ENST00000472679 PDLIM1O00151 329 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms