RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 KCNC2Q96PR1 638 aa9.16□□□□□ -0.94
CDHR3-209ENST00000472116 ZNF747Q9BV97 191 aa9.16□□□□□ -0.94
CDHR3-209ENST00000472116 PRR14Q9BWN1 585 aa9.16□□□□□ -0.94
CDHR3-209ENST00000472116 METTL17Q9H7H0 456 aaPredicted RBP9.16□□□□□ -0.94
CDHR3-209ENST00000472116 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.16□□□□□ -0.94
CDHR3-209ENST00000472116 WHRNQ9P202 907 aa9.16□□□□□ -0.94
CDHR3-209ENST00000472116 POU2F3Q9UKI9 436 aa9.16□□□□□ -0.94
CDHR3-209ENST00000472116 TRRAPQ9Y4A5 3859 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 LINC01387J3KSC0 135 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 GUCA1CO95843 209 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 IFNB1P01574 187 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 ARNTP27540 789 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 ABCD3P28288 659 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 ADH6P28332 368 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 TLX1P31314 330 aaPredicted RBP9.15□□□□□ -0.94
CDHR3-209ENST00000472116 STIP1P31948 543 aaKnown RBP9.15□□□□□ -0.94
CDHR3-209ENST00000472116 CTNNA1P35221 906 aaKnown RBP9.15□□□□□ -0.94
CDHR3-209ENST00000472116 EFNA4P52798 201 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 HADHBP55084 474 aaKnown RBP9.15□□□□□ -0.94
CDHR3-209ENST00000472116 RWDD2BP57060 319 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 C21orf58P58505 322 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 IGLV3-21P80748 117 aaPredicted RBP9.15□□□□□ -0.94
CDHR3-209ENST00000472116 ZNF844Q08AG5 666 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 CARTPTQ16568 116 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 CTU2Q2VPK5 515 aaKnown RBP9.15□□□□□ -0.94
CDHR3-209ENST00000472116 C6orf163Q5TEZ5 329 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 C11orf63Q6NUN7 778 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 TMEM81Q6P7N7 255 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 CES3Q6UWW8 571 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 RINLQ6ZS11 566 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 NUP54Q7Z3B4 507 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 THOC6Q86W42 341 aaKnown RBP9.15□□□□□ -0.94
CDHR3-209ENST00000472116 PLCZ1Q86YW0 608 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 ZNF619Q8N2I2 560 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 GBP7Q8N8V2 638 aaPredicted RBP9.15□□□□□ -0.94
CDHR3-209ENST00000472116 BBOF1Q8ND07 529 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 DOK4Q8TEW6 326 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 EEF1AKMT1Q8WVE0 214 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 MRPL24Q96A35 216 aaKnown RBP9.15□□□□□ -0.94
CDHR3-209ENST00000472116 FBXL8Q96CD0 374 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 MAPKAP1Q9BPZ7 522 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 USB1Q9BQ65 265 aaKnown RBP9.15□□□□□ -0.94
CDHR3-209ENST00000472116 GALNT9Q9HCQ5 603 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 FKBP7Q9Y680 259 aa9.15□□□□□ -0.94
CDHR3-209ENST00000472116 ARFGEF3Q5TH69 2177 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 PRKDCP78527 4128 aaKnown RBP9.14□□□□□ -0.95
CDHR3-209ENST00000472116 PRAMEF25A6NGN4 478 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 EFCAB8A8MWE9 144 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 H7C417 338 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 PPM1BO75688 479 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 GYPCP04921 128 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 NAGAP17050 411 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 TTKP33981 857 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 NR4A2P43354 598 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 IRF9Q00978 393 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 CHRNB3Q05901 458 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 LGALS3BPQ08380 585 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 TAB1Q15750 504 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 ASTE1Q2TB18 679 aaPredicted RBP9.14□□□□□ -0.95
CDHR3-209ENST00000472116 DEPDC1Q5TB30 811 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 RAET1LQ5VY80 246 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 SHQ1Q6PI26 577 aaKnown RBP9.14□□□□□ -0.95
CDHR3-209ENST00000472116 FIGNL1Q6PIW4 674 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 DGAT2L6Q6ZPD8 337 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 RBM43Q6ZSC3 357 aaKnown RBP9.14□□□□□ -0.95
CDHR3-209ENST00000472116 PEG10Q86TG7 708 aaKnown RBP9.14□□□□□ -0.95
CDHR3-209ENST00000472116 MUC15Q8N387 334 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 ZNF540Q8NDQ6 660 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 TANKQ92844 425 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 LINGO1Q96FE5 620 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 GMPPAQ96IJ6 420 aaPredicted RBP9.14□□□□□ -0.95
CDHR3-209ENST00000472116 VPS39Q96JC1 886 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 RADILQ96JH8 1075 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 KIFC1Q9BW19 673 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 RPF2Q9H7B2 306 aaKnown RBP9.14□□□□□ -0.95
CDHR3-209ENST00000472116 FBXO6Q9NRD1 293 aaPredicted RBP9.14□□□□□ -0.95
CDHR3-209ENST00000472116 MS4A12Q9NXJ0 267 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 PCDHB10Q9UN67 800 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 MRPS18CQ9Y3D5 142 aaKnown RBP9.14□□□□□ -0.95
CDHR3-209ENST00000472116 EPN1Q9Y6I3 576 aaPredicted RBP9.14□□□□□ -0.95
CDHR3-209ENST00000472116 PMF1-BGLAPU3KQ54 211 aa9.14□□□□□ -0.95
CDHR3-209ENST00000472116 RAMP1O60894 148 aa9.13□□□□□ -0.95
CDHR3-209ENST00000472116 RGS9O75916 674 aaPredicted RBP9.13□□□□□ -0.95
CDHR3-209ENST00000472116 ABCB1P08183 1280 aaPredicted RBP9.13□□□□□ -0.95
CDHR3-209ENST00000472116 C1GALT1C1LP0DN25 315 aa9.13□□□□□ -0.95
CDHR3-209ENST00000472116 ZNF23P17027 643 aa9.13□□□□□ -0.95
CDHR3-209ENST00000472116 GNAZP19086 355 aa9.13□□□□□ -0.95
CDHR3-209ENST00000472116 TPM4P67936 248 aa9.13□□□□□ -0.95
CDHR3-209ENST00000472116 FOXL1Q12952 345 aa9.13□□□□□ -0.95
CDHR3-209ENST00000472116 SLBPQ14493 270 aaKnown RBP eCLIP9.13□□□□□ -0.95
CDHR3-209ENST00000472116 GUSBP1Q15486 140 aa9.13□□□□□ -0.95
CDHR3-209ENST00000472116 AP5B1Q2VPB7 878 aa9.13□□□□□ -0.95
CDHR3-209ENST00000472116 ADPRMQ3LIE5 342 aa9.13□□□□□ -0.95
CDHR3-209ENST00000472116 EXOC3L1Q86VI1 746 aa9.13□□□□□ -0.95
CDHR3-209ENST00000472116 CCDC89Q8N998 374 aa9.13□□□□□ -0.95
CDHR3-209ENST00000472116 ACOT4Q8N9L9 421 aa9.13□□□□□ -0.95
CDHR3-209ENST00000472116 WDSUB1Q8N9V3 476 aa9.13□□□□□ -0.95
CDHR3-209ENST00000472116 OR4K17Q8NGC6 315 aa9.13□□□□□ -0.95
CDHR3-209ENST00000472116 PIWIL2Q8TC59 973 aaKnown RBP9.13□□□□□ -0.95
CDHR3-209ENST00000472116 DHRS9Q9BPW9 319 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms