RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 TRNT1Q96Q11 434 aaKnown RBP8.77□□□□□ -1.01
VPS52-216ENST00000471309 OR6C1Q96RD1 312 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 STACQ99469 402 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 SLC29A1Q99808 456 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 YIPF4Q9BSR8 244 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 SPATA5L1Q9BVQ7 753 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 OSBPL10Q9BXB5 764 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 PIGUQ9H490 435 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 Q9H521 79 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 ANKRA2Q9H9E1 313 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 CXorf21Q9HAI6 301 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 ZNF304Q9HCX3 659 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 DUSP22Q9NRW4 184 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 DHCR7Q9UBM7 475 aaKnown RBP8.77□□□□□ -1.01
VPS52-216ENST00000471309 FTSJ1Q9UET6 329 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 SATB2Q9UPW6 733 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 MAU2Q9Y6X3 613 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 ARID1BQ8NFD5 2236 aaPredicted RBP8.77□□□□□ -1.01
VPS52-216ENST00000471309 NUP214P35658 2090 aaPredicted RBP8.76□□□□□ -1.01
VPS52-216ENST00000471309 ZDBF2Q9HCK1 2354 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 IGKV3D-11A0A0A0MRZ8 115 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 SYNDIG1LA6NDD5 238 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 G3V2T6 193 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 PDLIM1O00151 329 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 GNGT2O14610 69 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 EI24O14681 340 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 DENRO43583 198 aaKnown RBP8.76□□□□□ -1.01
VPS52-216ENST00000471309 HYAL3O43820 417 aaPredicted RBP8.76□□□□□ -1.01
VPS52-216ENST00000471309 E2F6O75461 281 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 CDC123O75794 336 aaPredicted RBP8.76□□□□□ -1.01
VPS52-216ENST00000471309 DNAJB5O75953 348 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 SOX30O94993 753 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 H6PDO95479 791 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 CBX7O95931 251 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 ALOX5P09917 674 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 CT62P0C5K7 136 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 ACP2P11117 423 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 ITGA2P17301 1181 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 MAOAP21397 527 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 ALAS2P22557 587 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 DCTP40126 519 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 MAP3K8P41279 467 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 OR1D4P47884 311 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 KCNJ5P48544 419 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 BTG2P78543 158 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 HPCAP84074 193 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 KCNC4Q03721 635 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 DAG1Q14118 895 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 DUSP5Q16690 384 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 ARHGAP11BQ3KRB8 267 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 GPAT3Q53EU6 434 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 PHF19Q5T6S3 580 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 ARHGAP40Q5TG30 622 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 SHQ1Q6PI26 577 aaKnown RBP8.76□□□□□ -1.01
VPS52-216ENST00000471309 DGAT2L6Q6ZPD8 337 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 PRR23CQ6ZRP0 262 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 HIPK1Q86Z02 1210 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 SLC16A11Q8NCK7 471 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 SIMC1Q8NDZ2 872 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 CHDHQ8NE62 594 aaPredicted RBP8.76□□□□□ -1.01
VPS52-216ENST00000471309 OR5K1Q8NHB7 308 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 SPPL2AQ8TCT8 520 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.76□□□□□ -1.01
VPS52-216ENST00000471309 APOBEC4Q8WW27 367 aaKnown RBP8.76□□□□□ -1.01
VPS52-216ENST00000471309 CDS1Q92903 461 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 RIT1Q92963 219 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 OTUB1Q96FW1 271 aaPredicted RBP8.76□□□□□ -1.01
VPS52-216ENST00000471309 RBM18Q96H35 190 aaKnown RBP8.76□□□□□ -1.01
VPS52-216ENST00000471309 COL21A1Q96P44 957 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 ZNF300Q96RE9 604 aaPredicted RBP8.76□□□□□ -1.01
VPS52-216ENST00000471309 ZNF347Q96SE7 839 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 OSBPL11Q9BXB4 747 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 ALOXE3Q9BYJ1 711 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 GABARAPL1Q9H0R8 117 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 ADAP2Q9NPF8 381 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 MKKSQ9NPJ1 570 aaPredicted RBP8.76□□□□□ -1.01
VPS52-216ENST00000471309 RYDENQ9NUL5 291 aaKnown RBP8.76□□□□□ -1.01
VPS52-216ENST00000471309 USE1Q9NZ43 259 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 IFT80Q9P2H3 777 aaPredicted RBP8.76□□□□□ -1.01
VPS52-216ENST00000471309 SEC14L3Q9UDX4 400 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 RARRES3Q9UL19 164 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 PCDHGB3Q9Y5G1 929 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 AP4B1Q9Y6B7 739 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 AK5Q9Y6K8 562 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 PIEZO1Q92508 2521 aa8.76□□□□□ -1.01
VPS52-216ENST00000471309 KNL1Q8NG31 2342 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 IGLV3-12A0A075B6K2 115 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 MYOCOSA0A1B0GUC4 107 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 C7orf72A4D263 438 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 PRAMEF25A6NGN4 478 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 A8MVJ9 347 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 ADAMDEC1O15204 470 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 PRAMEF2O60811 474 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 JRKO75564 520 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 SCRG1O75711 98 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 RECKO95980 971 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 AK1P00568 194 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 IFNW1P05000 195 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 ALPLP05186 524 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 FESP07332 822 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms