RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 ACTRT2Q8TDY3 377 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 GRHL3Q8TE85 626 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 COQ8BQ96D53 544 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 SPACA9Q96E40 222 aaPredicted RBP18.23■□□□□ 0.51
HDAC7-220ENST00000471235 ELP4Q96EB1 424 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 OR52B2Q96RD2 323 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 DPY30Q9C005 99 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 FOLH1BQ9HBA9 442 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 ATAD3AQ9NVI7 634 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 DDX18Q9NVP1 670 aaKnown RBP18.23■□□□□ 0.51
HDAC7-220ENST00000471235 C19orf53Q9UNZ5 99 aaPredicted RBP18.23■□□□□ 0.51
HDAC7-220ENST00000471235 KLF13Q9Y2Y9 288 aaPredicted RBP18.23■□□□□ 0.51
HDAC7-220ENST00000471235 UPK1AO00322 258 aa18.22■□□□□ 0.51
HDAC7-220ENST00000471235 DIAPH2O60879 1101 aa18.22■□□□□ 0.51
HDAC7-220ENST00000471235 RASAL1O95294 804 aa18.22■□□□□ 0.51
HDAC7-220ENST00000471235 GPC1P35052 558 aa18.22■□□□□ 0.51
HDAC7-220ENST00000471235 MANFP55145 182 aaKnown RBP18.22■□□□□ 0.51
HDAC7-220ENST00000471235 ZNF155Q12901 538 aaPredicted RBP18.22■□□□□ 0.51
HDAC7-220ENST00000471235 IGFBP7Q16270 282 aa18.22■□□□□ 0.51
HDAC7-220ENST00000471235 MAPKAPK3Q16644 382 aa18.22■□□□□ 0.51
HDAC7-220ENST00000471235 EPGNQ6UW88 154 aa18.22■□□□□ 0.51
HDAC7-220ENST00000471235 TMEM64Q6YI46 380 aa18.22■□□□□ 0.51
HDAC7-220ENST00000471235 PRR22Q8IZ63 422 aa18.22■□□□□ 0.51
HDAC7-220ENST00000471235 ARFGAP2Q8N6H7 521 aa18.22■□□□□ 0.51
HDAC7-220ENST00000471235 GOLM1Q8NBJ4 401 aa18.22■□□□□ 0.51
HDAC7-220ENST00000471235 MAGED4Q96JG8 741 aa18.22■□□□□ 0.51
HDAC7-220ENST00000471235 LCORQ96JN0 433 aaPredicted RBP18.22■□□□□ 0.51
HDAC7-220ENST00000471235 MARK4Q96L34 752 aa18.22■□□□□ 0.51
HDAC7-220ENST00000471235 VSTM2LQ96N03 204 aa18.22■□□□□ 0.51
HDAC7-220ENST00000471235 BTBD9Q96Q07 612 aa18.22■□□□□ 0.51
HDAC7-220ENST00000471235 BARD1Q99728 777 aaKnown RBP18.22■□□□□ 0.51
HDAC7-220ENST00000471235 BHLHE41Q9C0J9 482 aaPredicted RBP18.22■□□□□ 0.51
HDAC7-220ENST00000471235 TIMMDC1Q9NPL8 285 aa18.22■□□□□ 0.51
HDAC7-220ENST00000471235 RYDENQ9NUL5 291 aaKnown RBP18.22■□□□□ 0.51
HDAC7-220ENST00000471235 MAPRE3Q9UPY8 281 aa18.22■□□□□ 0.51
HDAC7-220ENST00000471235 FREM3P0C091 2139 aa18.22■□□□□ 0.51
HDAC7-220ENST00000471235 FRG2CA6NGY1 282 aa18.21■□□□□ 0.51
HDAC7-220ENST00000471235 MLC1Q15049 377 aa18.21■□□□□ 0.51
HDAC7-220ENST00000471235 TMEM198Q66K66 360 aa18.21■□□□□ 0.51
HDAC7-220ENST00000471235 NPSR1Q6W5P4 371 aa18.21■□□□□ 0.51
HDAC7-220ENST00000471235 DND1Q8IYX4 353 aaKnown RBP18.21■□□□□ 0.51
HDAC7-220ENST00000471235 BCORP1Q8N888 145 aa18.21■□□□□ 0.51
HDAC7-220ENST00000471235 FRMD6Q96NE9 622 aa18.21■□□□□ 0.51
HDAC7-220ENST00000471235 PRPF18Q99633 342 aaKnown RBP18.21■□□□□ 0.51
HDAC7-220ENST00000471235 DUSP26Q9BV47 211 aa18.21■□□□□ 0.51
HDAC7-220ENST00000471235 SH2D2AQ9NP31 389 aa18.21■□□□□ 0.51
HDAC7-220ENST00000471235 SIRT3Q9NTG7 399 aaPredicted RBP18.21■□□□□ 0.51
HDAC7-220ENST00000471235 TAS2R9Q9NYW1 312 aa18.21■□□□□ 0.51
HDAC7-220ENST00000471235 GPR55Q9Y2T6 319 aaPredicted RBP18.21■□□□□ 0.51
HDAC7-220ENST00000471235 NPFFR2Q9Y5X5 522 aa18.21■□□□□ 0.51
HDAC7-220ENST00000471235 GPR45Q9Y5Y3 372 aa18.21■□□□□ 0.51
HDAC7-220ENST00000471235 PRRC2CQ9Y520 2896 aaKnown RBP18.2■□□□□ 0.5
HDAC7-220ENST00000471235 A0A0G2JMM0 328 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 A0A1W2PPB8 328 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 A0A1W2PRB8 838 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 A0A1W2PRS3 328 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 ASPDHA6ND91 283 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 KIR3DP1A8MWS1 328 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 J3QKU1 62 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 ACOX3O15254 700 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 ERN1O75460 977 aaKnown RBP18.2■□□□□ 0.5
HDAC7-220ENST00000471235 CCL3P10147 92 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 DRD5P21918 477 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 ABCD3P28288 659 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 PPICP45877 212 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 MEOX1P50221 254 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 CLNS1AP54105 237 aaKnown RBP18.2■□□□□ 0.5
HDAC7-220ENST00000471235 NME5P56597 212 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 NRG3P56975 720 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 CORO7P57737 925 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 GPR85P60893 370 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 DCAF7P61962 342 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 NTRK2Q16620 822 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 PGS1Q32NB8 556 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 LSM12Q3MHD2 195 aaKnown RBP18.2■□□□□ 0.5
HDAC7-220ENST00000471235 OR4F3Q6IEY1 312 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.2■□□□□ 0.5
HDAC7-220ENST00000471235 NATD1Q8N6N6 113 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 FAM98AQ8NCA5 519 aaKnown RBP18.2■□□□□ 0.5
HDAC7-220ENST00000471235 FAM13CQ8NE31 585 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 OR10G3Q8NGC4 313 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 TESCQ96BS2 214 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 HSPBAP1Q96EW2 488 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 SGCZQ96LD1 299 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 CLMPQ9H6B4 373 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 DEPPQ9NTK1 212 aa18.2■□□□□ 0.5
HDAC7-220ENST00000471235 TCP11X1B4DZS4 312 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 TO15178 435 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 PEX1O43933 1283 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 EDF1O60869 148 aaKnown RBP18.19■□□□□ 0.5
HDAC7-220ENST00000471235 TGDSO95455 350 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 C6orf47O95873 294 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 CT45A8P0DMV1 189 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 CT45A9P0DMV2 189 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 TMED10P49755 219 aaKnown RBP18.19■□□□□ 0.5
HDAC7-220ENST00000471235 IDH3AP50213 366 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 WNT3P56703 355 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 FBXW4P57775 412 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 UFM1P61960 85 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 CT45A2Q5DJT8 189 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms