RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 TMED10P49755 219 aaKnown RBP13.01□□□□□ -0.33
TOP3B-215ENST00000470338 PER3P56645 1201 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 PPIAP62937 165 aaKnown RBP13.01□□□□□ -0.33
TOP3B-215ENST00000470338 RPL38P63173 70 aaKnown RBP13.01□□□□□ -0.33
TOP3B-215ENST00000470338 CHI3L2Q15782 390 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 FGD2Q7Z6J4 655 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 FJX1Q86VR8 437 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 SLC22A16Q86VW1 577 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 FAM9CQ8IZT9 166 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 FAM13CQ8NE31 585 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 PPP1R14CQ8TAE6 165 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 AGR3Q8TD06 166 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 NTNG2Q96CW9 530 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 PPP3R2Q96LZ3 170 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 C3orf30Q96M34 536 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 SECISBP2Q96T21 854 aaKnown RBP13.01□□□□□ -0.33
TOP3B-215ENST00000470338 STMN4Q9H169 189 aaPredicted RBP13.01□□□□□ -0.33
TOP3B-215ENST00000470338 ANKRA2Q9H9E1 313 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 KCNK9Q9NPC2 374 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 TUBA8Q9NY65 449 aaPredicted RBP13.01□□□□□ -0.33
TOP3B-215ENST00000470338 GPR55Q9Y2T6 319 aaPredicted RBP13.01□□□□□ -0.33
TOP3B-215ENST00000470338 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.01□□□□□ -0.33
TOP3B-215ENST00000470338 NUP214P35658 2090 aaPredicted RBP13.01□□□□□ -0.33
TOP3B-215ENST00000470338 A0A087WV62 115 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 ACOT7O00154 380 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 PLOD2O00469 737 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 TO15178 435 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 ACOX3O15254 700 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 LYPLA1O75608 230 aaPredicted RBP13□□□□□ -0.33
TOP3B-215ENST00000470338 SLITRK5O94991 958 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 SNUPNO95149 360 aaKnown RBP13□□□□□ -0.33
TOP3B-215ENST00000470338 JUNP05412 331 aaKnown RBP13□□□□□ -0.33
TOP3B-215ENST00000470338 ABCB1P08183 1280 aaPredicted RBP13□□□□□ -0.33
TOP3B-215ENST00000470338 BCKDHAP12694 445 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 GP1BBP13224 206 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 GRK2P25098 689 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 FBXW4P57775 412 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 ABCE1P61221 599 aaKnown RBP13□□□□□ -0.33
TOP3B-215ENST00000470338 HSF1Q00613 529 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 PLGLB1Q02325 96 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 PDE7AQ13946 482 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 RPS6KA2Q15349 733 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 C3AR1Q16581 482 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 GALNTL6Q49A17 601 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 PRAMEF20Q5VT98 475 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 TMEM251Q8N6I4 163 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 OR7G2Q8NG99 324 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 SPPL2AQ8TCT8 520 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 MAGED4Q96JG8 741 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 AMDHD1Q96NU7 426 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 BTBD9Q96Q07 612 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 C20orf27Q9GZN8 174 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 DEFB127Q9H1M4 99 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 GLIPR2Q9H4G4 154 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 REEP4Q9H6H4 257 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 ZNF395Q9H8N7 513 aaPredicted RBP13□□□□□ -0.33
TOP3B-215ENST00000470338 BAIAP2L1Q9UHR4 511 aa13□□□□□ -0.33
TOP3B-215ENST00000470338 EPB41L3Q9Y2J2 1087 aaPredicted RBP13□□□□□ -0.33
TOP3B-215ENST00000470338 A0A1B0GTH9 108 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 FRG2CA6NGY1 282 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 FAM166BA8MTA8 275 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 CCL21O00585 134 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 ZNHIT1O43257 154 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 PEX11AO75192 247 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 PPM1BO75688 479 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 HSPA4LO95757 839 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 IGHG3P01860 377 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 IFI6P09912 130 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 CT45A8P0DMV1 189 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 CT45A9P0DMV2 189 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 NTSP30990 170 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 ASMTP46597 345 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 NCBP2P52298 156 aaKnown RBP eCLIP12.99□□□□□ -0.33
TOP3B-215ENST00000470338 SLC18A1P54219 525 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 CASP6P55212 293 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 KCNJ2P63252 427 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 CT45A2Q5DJT8 189 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 TBCELQ5QJ74 424 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 C6orf136Q5SQH8 315 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 TMEM81Q6P7N7 255 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 PAOXQ6QHF9 649 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 NUP54Q7Z3B4 507 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 PRR22Q8IZ63 422 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 FAM109AQ8N4B1 249 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 OR5M3Q8NGP4 307 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 DIO2Q92813 273 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 GFM2Q969S9 779 aaKnown RBP12.99□□□□□ -0.33
TOP3B-215ENST00000470338 TLCD1Q96CP7 247 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 MTERF3Q96E29 417 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 VSTM2LQ96N03 204 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 TSSK3Q96PN8 268 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 SORT1Q99523 831 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 ANGPTL4Q9BY76 406 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 TMBIM4Q9HC24 238 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 ZFP64Q9NPA5 681 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 TAS2R9Q9NYW1 312 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 GIMAP2Q9UG22 337 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 HAO1Q9UJM8 370 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 TINAGQ9UJW2 476 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 C19orf53Q9UNZ5 99 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms