RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 AIFM1O95831 613 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 WDPCPO95876 746 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 GSNP06396 782 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 HOXB9P17482 250 aaPredicted RBP12.69□□□□□ -0.38
LINC00173-201ENST00000470091 SLC6A2P23975 617 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 SOX11P35716 441 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 ST13P50502 369 aaKnown RBP12.69□□□□□ -0.38
LINC00173-201ENST00000470091 EMP3P54852 163 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 OLR1P78380 273 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 KPNB1Q14974 876 aaKnown RBP12.69□□□□□ -0.38
LINC00173-201ENST00000470091 HEPACAMQ14CZ8 416 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 MPEG1Q2M385 716 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 RABL3Q5HYI8 236 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 SAMD4BQ5PRF9 694 aaKnown RBP12.69□□□□□ -0.38
LINC00173-201ENST00000470091 LRIF1Q5T3J3 769 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 NDUFAF5Q5TEU4 345 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 MFSD4BQ5TF39 518 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 ANXA8L1Q5VT79 327 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 RPUSD3Q6P087 351 aaKnown RBP12.69□□□□□ -0.38
LINC00173-201ENST00000470091 GFRALQ6UXV0 394 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 PDSS2Q86YH6 399 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 SHISA5Q8N114 240 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 ARHGEF39Q8N4T4 335 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 FAM47BQ8NA70 645 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 FAM156AQ8NDB6 213 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 OR9A4Q8NGU2 314 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 WDR60Q8WVS4 1066 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 HAS2Q92819 552 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 UCN3Q969E3 161 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 EXOSC8Q96B26 276 aaKnown RBP12.69□□□□□ -0.38
LINC00173-201ENST00000470091 CCDC115Q96NT0 180 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 SERINC2Q96SA4 455 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 FAIM2Q9BWQ8 316 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 ROGDIQ9GZN7 287 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 DENND2DQ9H6A0 471 aaPredicted RBP12.69□□□□□ -0.38
LINC00173-201ENST00000470091 MKKSQ9NPJ1 570 aaPredicted RBP12.69□□□□□ -0.38
LINC00173-201ENST00000470091 ATAD3AQ9NVI7 634 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 SLC25A37Q9NYZ2 338 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 STMN3Q9NZ72 180 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 VAPAQ9P0L0 249 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 ABCD2Q9UBJ2 740 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 ATG4BQ9Y4P1 393 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 PCDHA9Q9Y5H5 950 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 TRBV5-3A0A0A0MS03 114 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 C15orf38-AP3S2A0A0A6YYH1 394 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 A0A1B0GUH1 482 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 PRSS44E7EML9 344 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 RNASET2O00584 256 aaKnown RBP12.68□□□□□ -0.38
LINC00173-201ENST00000470091 B3GALT2O43825 422 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 TBX19O60806 448 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 ERN1O75460 977 aaKnown RBP12.68□□□□□ -0.38
LINC00173-201ENST00000470091 NPPAP01160 153 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 STSP08842 583 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 ZNF10P21506 573 aaPredicted RBP12.68□□□□□ -0.38
LINC00173-201ENST00000470091 PTPN6P29350 595 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 EFNA3P52797 238 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 MTPNP58546 118 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 PCOLCEQ15113 449 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 MINDY4Q4G0A6 757 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 C1orf146Q5VVC0 180 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 GARNL3Q5VVW2 1013 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 ZNF324BQ6AW86 544 aaPredicted RBP12.68□□□□□ -0.38
LINC00173-201ENST00000470091 NANOGP8Q6NSW7 305 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 FAM180BQ6P0A1 224 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 NET1Q7Z628 596 aaPredicted RBP12.68□□□□□ -0.38
LINC00173-201ENST00000470091 ARPINQ7Z6K5 226 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 ZC3H7AQ8IWR0 971 aaKnown RBP12.68□□□□□ -0.38
LINC00173-201ENST00000470091 SLC15A3Q8IY34 581 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 OR4A15Q8NGL6 344 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 METTL21AQ8WXB1 218 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 MARVELD3Q96A59 401 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 MVB12AQ96EY5 273 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 AURKBQ96GD4 344 aaPredicted RBP12.68□□□□□ -0.38
LINC00173-201ENST00000470091 CPPED1Q9BRF8 314 aaPredicted RBP12.68□□□□□ -0.38
LINC00173-201ENST00000470091 TGIF2Q9GZN2 237 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 ZNF700Q9H0M5 742 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 NANOGQ9H9S0 305 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 C14orf105Q9NVL8 296 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 BTNL2Q9UIR0 455 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 L3MBTL1Q9Y468 752 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 DCHS2Q6V1P9 2916 aa12.68□□□□□ -0.38
LINC00173-201ENST00000470091 TRGV8A0A0C4DH27 118 aa12.67□□□□□ -0.38
LINC00173-201ENST00000470091 PRSS51A0A1B0GVH4 220 aa12.67□□□□□ -0.38
LINC00173-201ENST00000470091 PRORSD1PA6NEY8 169 aa12.67□□□□□ -0.38
LINC00173-201ENST00000470091 GLOD5A6NK44 160 aa12.67□□□□□ -0.38
LINC00173-201ENST00000470091 TXNDC9O14530 226 aa12.67□□□□□ -0.38
LINC00173-201ENST00000470091 PCDH17O14917 1159 aa12.67□□□□□ -0.38
LINC00173-201ENST00000470091 PDPK1O15530 556 aa12.67□□□□□ -0.38
LINC00173-201ENST00000470091 GALR3O60755 368 aaPredicted RBP12.67□□□□□ -0.38
LINC00173-201ENST00000470091 DNAJB6O75190 326 aa12.67□□□□□ -0.38
LINC00173-201ENST00000470091 GUCY1B2O75343 617 aa12.67□□□□□ -0.38
LINC00173-201ENST00000470091 RDH16O75452 317 aa12.67□□□□□ -0.38
LINC00173-201ENST00000470091 SEC24DO94855 1032 aaPredicted RBP12.67□□□□□ -0.38
LINC00173-201ENST00000470091 ANP32DO95626 131 aa12.67□□□□□ -0.38
LINC00173-201ENST00000470091 C6orf47O95873 294 aa12.67□□□□□ -0.38
LINC00173-201ENST00000470091 C8orf89P0DMQ9 161 aa12.67□□□□□ -0.38
LINC00173-201ENST00000470091 NR2F6P10588 404 aa12.67□□□□□ -0.38
LINC00173-201ENST00000470091 PRF1P14222 555 aa12.67□□□□□ -0.38
LINC00173-201ENST00000470091 DRD2P14416 443 aa12.67□□□□□ -0.38
LINC00173-201ENST00000470091 TCN1P20061 433 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms