RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 DCAKDQ8WVC6 231 aa15.97■□□□□ 0.15
COL7A1-208ENST00000470076 ABTB1Q969K4 478 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-208ENST00000470076 CTHRC1Q96CG8 243 aa15.97■□□□□ 0.15
COL7A1-208ENST00000470076 KLHL29Q96CT2 875 aa15.97■□□□□ 0.15
COL7A1-208ENST00000470076 FAIM2Q9BWQ8 316 aa15.97■□□□□ 0.15
COL7A1-208ENST00000470076 ITPAQ9BY32 194 aa15.97■□□□□ 0.15
COL7A1-208ENST00000470076 UGT2B28Q9BY64 529 aa15.97■□□□□ 0.15
COL7A1-208ENST00000470076 RASSF1Q9NS23 344 aa15.97■□□□□ 0.15
COL7A1-208ENST00000470076 CRIM1Q9NZV1 1036 aa15.97■□□□□ 0.15
COL7A1-208ENST00000470076 ZNF780BQ9Y6R6 833 aa15.97■□□□□ 0.15
COL7A1-208ENST00000470076 MPDZO75970 2070 aa15.97■□□□□ 0.15
COL7A1-208ENST00000470076 MED12Q93074 2177 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 FAM221AA4D161 298 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 KDM4EB2RXH2 506 aaPredicted RBP15.96■□□□□ 0.15
COL7A1-208ENST00000470076 PPP6CO00743 305 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 ACTL6AO96019 429 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 SBK3P0C264 359 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 RHOXF2BP0C7M4 288 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 HSD3B1P14060 373 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 HSD3B2P26439 372 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 GCKP35557 465 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 ZNF136P52737 540 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 WNT3P56703 355 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 PLCXD2Q0VAA5 305 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 SNTB1Q13884 538 aaKnown RBP15.96■□□□□ 0.15
COL7A1-208ENST00000470076 EXOSC7Q15024 291 aaKnown RBP15.96■□□□□ 0.15
COL7A1-208ENST00000470076 EIPR1Q53HC9 387 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 WIPI1Q5MNZ9 446 aaPredicted RBP15.96■□□□□ 0.15
COL7A1-208ENST00000470076 ANGPTL8Q6UXH0 198 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 MMP21Q8N119 569 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 TMEM151AQ8N4L1 468 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 C1orf52Q8N6N3 182 aaKnown RBP15.96■□□□□ 0.15
COL7A1-208ENST00000470076 FAM222BQ8WU58 562 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 IFT81Q8WYA0 676 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 HGDQ93099 445 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 OMA1Q96E52 524 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 WDYHV1Q96HA8 205 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 FOXC2Q99958 501 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 GPATCH1Q9BRR8 931 aaKnown RBP15.96■□□□□ 0.15
COL7A1-208ENST00000470076 OSBPL11Q9BXB4 747 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 CLEC4MQ9H2X3 399 aaPredicted RBP15.96■□□□□ 0.15
COL7A1-208ENST00000470076 VPS29Q9UBQ0 182 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 PRODH2Q9UF12 536 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 EDARQ9UNE0 448 aa15.96■□□□□ 0.15
COL7A1-208ENST00000470076 PRRC2AP48634 2157 aaKnown RBP15.95■□□□□ 0.14
COL7A1-208ENST00000470076 A0A087WUV0 522 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-208ENST00000470076 MBD3L4A6NDZ8 208 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-208ENST00000470076 MBD3L3A6NE82 208 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-208ENST00000470076 MBD3L5A6NJ08 208 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-208ENST00000470076 SNPHO15079 494 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 ICOSLGO75144 302 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 OR4F21O95013 312 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 CBX7O95931 251 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 KRT6AP02538 564 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 KRT6BP04259 564 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 SNRPAP09012 282 aaKnown RBP15.95■□□□□ 0.14
COL7A1-208ENST00000470076 TSPAN8P19075 237 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 DRD5P21918 477 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 HSD17B3P37058 310 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 PPICP45877 212 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 KRT6CP48668 564 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 ALDH9A1P49189 494 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 NAGLUP54802 743 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 CLCQ05315 142 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 RCAN2Q14206 197 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 LGSNQ5TDP6 509 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 FAM83FQ8NEG4 500 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-208ENST00000470076 ADCY4Q8NFM4 1077 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 OR52R1Q8NGF1 315 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 MBD3L2Q8NHZ7 208 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-208ENST00000470076 CNRIP1Q96F85 164 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-208ENST00000470076 RMND5BQ96G75 393 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-208ENST00000470076 ZNF681Q96N22 645 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 TRIB1Q96RU8 372 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 NODALQ96S42 347 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 CXXC4Q9H2H0 198 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 CALHM2Q9HA72 323 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 KLRF1Q9NZS2 232 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 ST6GALNAC2Q9UJ37 374 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 ZNF225Q9UK10 706 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 PLLPQ9Y342 182 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 KIAA1549Q9HCM3 1950 aa15.95■□□□□ 0.14
COL7A1-208ENST00000470076 A6NNC1 897 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 TO15178 435 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 CBR3O75828 277 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 BCAS2O75934 225 aaPredicted RBP15.94■□□□□ 0.14
COL7A1-208ENST00000470076 TAC1P20366 129 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 CTSSP25774 331 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 ECHS1P30084 290 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 OPRM1P35372 400 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 SOX18P35713 384 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 PTGDSP41222 190 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 EMDP50402 254 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 DUSP2Q05923 314 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 CSTF3Q12996 717 aaKnown RBP15.94■□□□□ 0.14
COL7A1-208ENST00000470076 RASA2Q15283 850 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 TRMT12Q53H54 448 aaKnown RBP15.94■□□□□ 0.14
COL7A1-208ENST00000470076 TEX35Q5T0J7 233 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 DCST1Q5T197 706 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 YRDCQ86U90 279 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms