RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 SAC3D1A6NKF1 404 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 FAM159BA6NKW6 160 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 NPIPB5A8MRT5 1133 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 ARHGEF33A8MVX0 844 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 NPIPB4C9JG80 1138 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 BTN3A3O00478 584 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 PEX12O00623 359 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 KIF1CO43896 1103 aaKnown RBP5.89□□□□□ -1.47
PTCD3-208ENST00000469585 SMIM24O75264 130 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 SLC16A8O95907 504 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 ABHD2P08910 425 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 SNRPAP09012 282 aaKnown RBP5.89□□□□□ -1.47
PTCD3-208ENST00000469585 RBP1P09455 135 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 FGF5P12034 268 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 GFAPP14136 432 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 ST6GAL1P15907 406 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 TCN2P20062 427 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 MAGP20916 626 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 CA5AP35218 305 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 CCR8P51685 355 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 CDKN2DP55273 166 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 NANOS3P60323 173 aaKnown RBP5.89□□□□□ -1.47
PTCD3-208ENST00000469585 CDKL1Q00532 357 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 RGS1Q08116 209 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 RCN2Q14257 317 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 PAGE2BQ5JRK9 111 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 CDKL4Q5MAI5 379 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 SULT1C3Q6IMI6 304 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 PIWIL4Q7Z3Z4 852 aaKnown RBP5.89□□□□□ -1.47
PTCD3-208ENST00000469585 MDGA2Q7Z553 956 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 LCA5Q86VQ0 697 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 MARCH9Q86YJ5 346 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 RAB43Q86YS6 212 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 UEVLDQ8IX04 471 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 GALNT16Q8N428 558 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 SNX31Q8N9S9 440 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 LMNTD1Q8N9Z9 388 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 NOA1Q8NC60 698 aaKnown RBP5.89□□□□□ -1.47
PTCD3-208ENST00000469585 TTLQ8NG68 377 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 OR52N4Q8NGI2 321 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 HMGCLL1Q8TB92 370 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 LKAAEAR1Q8TD35 194 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 IGFBPL1Q8WX77 278 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 EXT2Q93063 718 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 UBE2E3Q969T4 207 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 ATP6V1E2Q96A05 226 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 PDLIM5Q96HC4 596 aaKnown RBP5.89□□□□□ -1.47
PTCD3-208ENST00000469585 IP6K3Q96PC2 410 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 OR2A14Q96R47 310 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 PAFAH2Q99487 392 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 PKP4Q99569 1192 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 GPR22Q99680 433 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 AIF1LQ9BQI0 150 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 PITPNM3Q9BZ71 974 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 DERL2Q9GZP9 239 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 CHRNA10Q9GZZ6 450 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 DRC3Q9H069 523 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 CDC42EP4Q9H3Q1 356 aaKnown RBP5.89□□□□□ -1.47
PTCD3-208ENST00000469585 ASCL3Q9NQ33 180 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 TMEM184CQ9NVA4 438 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 OGFRQ9NZT2 677 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 IFT80Q9P2H3 777 aaPredicted RBP5.89□□□□□ -1.47
PTCD3-208ENST00000469585 PSMC3IPQ9P2W1 217 aaPredicted RBP5.89□□□□□ -1.47
PTCD3-208ENST00000469585 NXT1Q9UKK6 140 aaKnown RBP5.89□□□□□ -1.47
PTCD3-208ENST00000469585 RUVBL2Q9Y230 463 aaKnown RBP5.89□□□□□ -1.47
PTCD3-208ENST00000469585 OARD1Q9Y530 152 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 NFS1Q9Y697 457 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 WDR87Q6ZQQ6 2873 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 DMXL1Q9Y485 3027 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 LAMA1P25391 3075 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 A0A1B0GX78 115 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 ANKDD1BA6NHY2 528 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 NCF1BA6NI72 391 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-208ENST00000469585 CGB1A6NKQ9 187 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 SRRM3A6NNA2 597 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-208ENST00000469585 NCF1CA8MVU1 366 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-208ENST00000469585 GFYI3L273 518 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 PPP6CO00743 305 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 DSCR3O14972 297 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 SERPIND1P05546 499 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 TPBGLP0DKB5 382 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 LYL1P12980 280 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 NCF1P14598 390 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-208ENST00000469585 FOLR1P15328 257 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 GNAZP19086 355 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 CERS1P27544 350 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 GSTM2P28161 218 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 DLSTP36957 453 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 PDX1P52945 283 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 VSX2P58304 361 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-208ENST00000469585 TBPL1P62380 186 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 DCDP81605 110 aaKnown RBP5.88□□□□□ -1.47
PTCD3-208ENST00000469585 CFHR1Q03591 330 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 PRDX1Q06830 199 aaKnown RBP5.88□□□□□ -1.47
PTCD3-208ENST00000469585 ASPHQ12797 758 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 NAE1Q13564 534 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 KCTD19Q17RG1 926 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-208ENST00000469585 ZNF658BQ4V348 819 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-208ENST00000469585 ZNF789Q5FWF6 425 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 MFSD4BQ5TF39 518 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms