RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 OPRM1P35372 400 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 PEX19P40855 299 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 CCNG1P51959 295 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 PHEXP78562 749 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 SLC7A5Q01650 507 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 LTBQ06643 244 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 LTB4RQ15722 352 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 OR5M10Q6IEU7 315 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 CAMKMTQ7Z624 323 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 KIF18BQ86Y91 864 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 GCNT2Q8N0V5 402 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 PTGR2Q8N8N7 351 aaPredicted RBP11.16□□□□□ -0.62
HDAC3-204ENST00000469207 ZPLD1Q8TCW7 415 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 TM4SF18Q96CE8 201 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 REPS1Q96D71 796 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 OMA1Q96E52 524 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 SECISBP2Q96T21 854 aaKnown RBP11.16□□□□□ -0.62
HDAC3-204ENST00000469207 SERPINI1Q99574 410 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 YIPF4Q9BSR8 244 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 RBM24Q9BX46 236 aaKnown RBP11.16□□□□□ -0.62
HDAC3-204ENST00000469207 GRPEL1Q9HAV7 217 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 MAT2BQ9NZL9 334 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 RNF14Q9UBS8 474 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 FOXD3Q9UJU5 478 aaPredicted RBP11.16□□□□□ -0.62
HDAC3-204ENST00000469207 PCDHA9Q9Y5H5 950 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 ANKHD1Q8IWZ3 2542 aaKnown RBP11.16□□□□□ -0.62
HDAC3-204ENST00000469207 FLNAP21333 2647 aaKnown RBP11.15□□□□□ -0.62
HDAC3-204ENST00000469207 ESYT3A0FGR9 886 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 B4DXG7 233 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 SNPHO15079 494 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 UGDHO60701 494 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 CBX7O95931 251 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 CYP4B1P13584 511 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 FOSL1P15407 271 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 STX2P32856 288 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 TMED10P49755 219 aaKnown RBP11.15□□□□□ -0.62
HDAC3-204ENST00000469207 MRPS35P82673 323 aaKnown RBP11.15□□□□□ -0.62
HDAC3-204ENST00000469207 MAP4K2Q12851 820 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 TRAF3Q13114 568 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 TECRLQ5HYJ1 363 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 FRG2Q64ET8 278 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 TTC19Q6DKK2 380 aaPredicted RBP11.15□□□□□ -0.62
HDAC3-204ENST00000469207 SLC48A1Q6P1K1 146 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 NUP54Q7Z3B4 507 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 METTL4Q8N3J2 472 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 OR7G1Q8NGA0 311 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 OR4F6Q8NGB9 312 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 OR52R1Q8NGF1 315 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 FRG2BQ96QU4 278 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 HBEGFQ99075 208 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 GALNT8Q9NY28 637 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 KLRF1Q9NZS2 232 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 ZNF639Q9UID6 485 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 FBXL2Q9UKC9 423 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 EDARQ9UNE0 448 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 EXO1Q9UQ84 846 aaKnown RBP11.15□□□□□ -0.62
HDAC3-204ENST00000469207 PLLPQ9Y342 182 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 UTP11Q9Y3A2 253 aaKnown RBP11.15□□□□□ -0.62
HDAC3-204ENST00000469207 WIF1Q9Y5W5 379 aa11.15□□□□□ -0.62
HDAC3-204ENST00000469207 EXPH5Q8NEV8 1989 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 SEMA3DO95025 777 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 RCBTB2O95199 551 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 TGM6O95932 706 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 ACTL6AO96019 429 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 PDYNP01213 254 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 CTAGE8P0CG41 777 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 DRD2P14416 443 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 CPN1P15169 458 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 PCSK2P16519 638 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 DEKP35659 375 aaKnown RBP11.14□□□□□ -0.63
HDAC3-204ENST00000469207 EMDP50402 254 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 MAPK12P53778 367 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 CDH13P55290 713 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 DCAF7P61962 342 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 NKX6-1P78426 367 aaPredicted RBP11.14□□□□□ -0.63
HDAC3-204ENST00000469207 FAM27E3Q08E93 113 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 GALNT1Q10472 559 aaPredicted RBP11.14□□□□□ -0.63
HDAC3-204ENST00000469207 RCAN2Q14206 197 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 SF3B4Q15427 424 aaKnown RBP eCLIP11.14□□□□□ -0.63
HDAC3-204ENST00000469207 TCHHL1Q5QJ38 904 aaPredicted RBP11.14□□□□□ -0.63
HDAC3-204ENST00000469207 SLC30A6Q6NXT4 461 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 COMMD6Q7Z4G1 85 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 MILR1Q7Z6M3 343 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 ADGRE4PQ86SQ3 457 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 CTAGE4Q8IX94 777 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 CIARTQ8N365 385 aaPredicted RBP11.14□□□□□ -0.63
HDAC3-204ENST00000469207 C17orf47Q8NEP4 570 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 OR14L1PQ8NHC6 308 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 TMBIM1Q969X1 311 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 CNRIP1Q96F85 164 aaPredicted RBP11.14□□□□□ -0.63
HDAC3-204ENST00000469207 LCORQ96JN0 433 aaPredicted RBP11.14□□□□□ -0.63
HDAC3-204ENST00000469207 NTMT1Q9BV86 223 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 OSBPL11Q9BXB4 747 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 C6orf203Q9P0P8 240 aaPredicted RBP11.14□□□□□ -0.63
HDAC3-204ENST00000469207 HEY2Q9UBP5 337 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 FETUBQ9UGM5 382 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 PCTPQ9UKL6 214 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 SLC12A4Q9UP95 1085 aa11.14□□□□□ -0.63
HDAC3-204ENST00000469207 TNPO3Q9Y5L0 923 aaKnown RBP11.14□□□□□ -0.63
HDAC3-204ENST00000469207 H0Y3Z8 333 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms