RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 SRPK3Q9UPE1 567 aa9.55□□□□□ -0.88
MSH5-213ENST00000468136 MGAT4BQ9UQ53 548 aa9.55□□□□□ -0.88
MSH5-213ENST00000468136 CFL2Q9Y281 166 aa9.55□□□□□ -0.88
MSH5-213ENST00000468136 SH3GLB1Q9Y371 365 aa9.55□□□□□ -0.88
MSH5-213ENST00000468136 SNX11Q9Y5W9 270 aa9.55□□□□□ -0.88
MSH5-213ENST00000468136 C5orf42Q9H799 3197 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 CACNA1IQ9P0X4 2223 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 A0A1W2PRQ8 180 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 SGK494L7N484 410 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 BCKDKO14874 412 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 FGF17O60258 216 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 MPZL2O60487 215 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 PRAMEF10O60809 474 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 STX11O75558 287 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 PRKRAO75569 313 aaKnown RBP9.54□□□□□ -0.88
MSH5-213ENST00000468136 CER1O95813 267 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 OPN1SWP03999 348 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 H1F0P07305 194 aaKnown RBP9.54□□□□□ -0.88
MSH5-213ENST00000468136 SYPP08247 313 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 SMIM18P0DKX4 95 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 C8orf89P0DMQ9 161 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 ALDH4A1P30038 563 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 DAPP51397 102 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 IST1P53990 364 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 PSMD4P55036 377 aaKnown RBP9.54□□□□□ -0.88
MSH5-213ENST00000468136 RPS26P62854 115 aaKnown RBP9.54□□□□□ -0.88
MSH5-213ENST00000468136 ACY1Q03154 408 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 DUSP8Q13202 625 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 DGCR6Q14129 220 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 MAPK11Q15759 364 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 SYPL1Q16563 259 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 DUSP7Q16829 419 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 PRICKLE4Q2TBC4 344 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 DCST1Q5T197 706 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 TMEM71Q6P5X7 295 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 SLC44A2Q8IWA5 706 aaPredicted RBP9.54□□□□□ -0.88
MSH5-213ENST00000468136 SFTPA2Q8IWL1 248 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 GALNT12Q8IXK2 581 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 SLC35F3Q8IY50 421 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 ZNF786Q8N393 782 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 VWA5B2Q8N398 1253 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 SLC25A45Q8N413 288 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 OR7G2Q8NG99 324 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 OR7G1Q8NGA0 311 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 FBLIM1Q8WUP2 373 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 UCN3Q969E3 161 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 COL26A1Q96A83 441 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 ANKRD9Q96BM1 317 aaPredicted RBP9.54□□□□□ -0.88
MSH5-213ENST00000468136 MAGED4Q96JG8 741 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 PRRC1Q96M27 445 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 CSF3RQ99062 836 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 AMBRA1Q9C0C7 1298 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 GRIP2Q9C0E4 1043 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 SAP130Q9H0E3 1048 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 ZNF768Q9H5H4 540 aaKnown RBP9.54□□□□□ -0.88
MSH5-213ENST00000468136 SMURF2Q9HAU4 748 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 CCNB1IP1Q9NPC3 277 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 PRDM6Q9NQX0 595 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 PRTFDC1Q9NRG1 225 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 PAPOLBQ9NRJ5 636 aaKnown RBP9.54□□□□□ -0.88
MSH5-213ENST00000468136 ACER3Q9NUN7 267 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 UCKL1Q9NWZ5 548 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 MAT2BQ9NZL9 334 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 PRODH2Q9UF12 536 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 NDRG4Q9ULP0 352 aaKnown RBP9.54□□□□□ -0.88
MSH5-213ENST00000468136 WDR45Q9Y484 360 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 U3KQV3 271 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 CEP192Q8TEP8 1941 aa9.54□□□□□ -0.88
MSH5-213ENST00000468136 IGHV5-51A0A0C4DH38 117 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 E9PQ18 207 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 FOXS1O43638 330 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 FMO6PO60774 539 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 PRAMEF2O60811 474 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 SDC3O75056 442 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 RDH16O75452 317 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 UGT2B17O75795 530 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 OR2B3O76000 313 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 NKX2-2O95096 273 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 DBIP07108 87 aaKnown RBP9.53□□□□□ -0.88
MSH5-213ENST00000468136 CHRM4P08173 479 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 CYC1P08574 325 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 NELFEP18615 380 aaKnown RBP9.53□□□□□ -0.88
MSH5-213ENST00000468136 LCN1P31025 176 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 MAP3K8P41279 467 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 STT3AP46977 705 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 CASP9P55211 416 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 CDH12P55289 794 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 PPP1CAP62136 330 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 DUSP2Q05923 314 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 DMWDQ09019 674 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 NPRL3Q12980 569 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 PUM1Q14671 1186 aaKnown RBP eCLIP9.53□□□□□ -0.88
MSH5-213ENST00000468136 PROX2Q3B8N5 592 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 ZNF311Q5JNZ3 666 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 TCTN3Q6NUS6 607 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 FAM180BQ6P0A1 224 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 CD300LDQ6UXZ3 194 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 CEP68Q76N32 757 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 KANSL1Q7Z3B3 1105 aa9.53□□□□□ -0.88
MSH5-213ENST00000468136 TSEN54Q7Z6J9 526 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms