RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 PITPNAQ00169 270 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 PIGFQ07326 219 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 RPS26P11Q5JNZ5 115 aaPredicted RBP13.06□□□□□ -0.32
BRAT1-203ENST00000467558 KIAA0895LQ68EN5 471 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 VWA5B2Q8N398 1253 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 CHST4Q8NCG5 386 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 RNASE11Q8TAA1 199 aaKnown RBP13.06□□□□□ -0.32
BRAT1-203ENST00000467558 ZNF559Q9BR84 538 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 HHATLQ9HCP6 504 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 TAAR2Q9P1P5 351 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 STOML2Q9UJZ1 356 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 SLC5A10A0PJK1 596 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 CELP19835 753 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 PFN3P60673 137 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 VBP1P61758 197 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 ACY1Q03154 408 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 TDGQ13569 410 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 ZNF829Q3KNS6 432 aaPredicted RBP13.06□□□□□ -0.32
BRAT1-203ENST00000467558 MCATQ8IVS2 390 aaKnown RBP13.06□□□□□ -0.32
BRAT1-203ENST00000467558 LMNTD1Q8N9Z9 388 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 CAPSLQ8WWF8 208 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 TFAP2CQ92754 450 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 SGTBQ96EQ0 304 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 HSPA12BQ96MM6 686 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 CPPED1Q9BRF8 314 aaPredicted RBP13.06□□□□□ -0.32
BRAT1-203ENST00000467558 CA5BQ9Y2D0 317 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 CXorf51AA0A1B0GTR3 108 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 RDH16O75452 317 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 STSP08842 583 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 PGCP20142 388 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 FUT4P22083 530 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 MLLT10P55197 1068 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 CRYZQ08257 329 aaKnown RBP13.05□□□□□ -0.32
BRAT1-203ENST00000467558 PIN1Q13526 163 aaPredicted RBP13.05□□□□□ -0.32
BRAT1-203ENST00000467558 PROX2Q3B8N5 592 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 CHRDL2Q6WN34 429 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 KRT77Q7Z794 578 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 THEM6Q8WUY1 208 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 ZNF583Q96ND8 569 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 LPAR4Q99677 370 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 MALT1Q9UDY8 824 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 A0A1W2PRG6 482 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 SCO2O43819 266 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 DPTQ07507 201 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 SPHARQ15513 63 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 DEFB133Q30KQ1 61 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 ZNF740Q8NDX6 193 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 ZNF548Q8NEK5 533 aaPredicted RBP13.05□□□□□ -0.32
BRAT1-203ENST00000467558 SECISBP2Q96T21 854 aaKnown RBP13.05□□□□□ -0.32
BRAT1-203ENST00000467558 C1QTNF3Q9BXJ4 246 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 PINK1Q9BXM7 581 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 TMEM168Q9H0V1 697 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 SEC61A2Q9H9S3 476 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 A0A0A6YYC8 382 aaPredicted RBP13.05□□□□□ -0.32
BRAT1-203ENST00000467558 SLC9B1P1A6NJY1 282 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 I3L1I5 382 aaPredicted RBP13.05□□□□□ -0.32
BRAT1-203ENST00000467558 M0R3H8 397 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 KLHL18O94889 574 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 NPPBP16860 134 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 MAP2K4P45985 399 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 OR12D2P58182 307 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 XKR7Q5GH72 579 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 ALG10BQ5I7T1 473 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 C1orf53Q5VUE5 145 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 HLA-CQ95604 372 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 CMKLR1Q99788 373 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 PDCD10Q9BUL8 212 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 GPN1Q9HCN4 374 aaPredicted RBP13.05□□□□□ -0.32
BRAT1-203ENST00000467558 ST14Q9Y5Y6 855 aa13.05□□□□□ -0.32
BRAT1-203ENST00000467558 GXYLT2A0PJZ3 443 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 RNF13O43567 381 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 CNR2P34972 360 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 RASGEF1BQ0VAM2 473 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 CBX3Q13185 183 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 SELPLGQ14242 412 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 LILRA6Q6PI73 481 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 SIX5Q8N196 739 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 MINDY2Q8NBR6 621 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 NEK7Q8TDX7 302 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 MMP27Q9H306 513 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 NMNAT1Q9HAN9 279 aaPredicted RBP13.04□□□□□ -0.32
BRAT1-203ENST00000467558 ALKBH4Q9NXW9 302 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 SLC22A31A6NKX4 558 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 GFYI3L273 518 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 HBQ1P09105 142 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 ACTC1P68032 377 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 ACTA1P68133 377 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 C1orf189Q5VU69 101 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 OR5D16Q8NGK9 328 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 SFXN5Q8TD22 340 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 TRUB1Q8WWH5 349 aaKnown RBP13.04□□□□□ -0.32
BRAT1-203ENST00000467558 GATA6Q92908 595 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 GNG8Q9UK08 70 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 AREL1O15033 823 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 SYPP08247 313 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 PVRP15151 417 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 CBLP22681 906 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 PMS2P3Q13401 168 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 MAPK14Q16539 360 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 PLEKHG7Q6ZR37 379 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms