RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	OR4D9	Q8NGE8	314 aa		11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	SLC9A6	Q92581	669 aa		11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	PROX1	Q92786	737 aa		11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	CCDC74B	Q96LY2	380 aa		11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	DGAT2	Q96PD7	388 aa		11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	ZNF300	Q96RE9	604 aa	Predicted RBP	11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	ZNF347	Q96SE7	839 aa		11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	DPYSL5	Q9BPU6	564 aa		11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	RBM4B	Q9BQ04	359 aa	Known RBP	11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	NDC1	Q9BTX1	674 aa		11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	SPATA5L1	Q9BVQ7	753 aa		11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	RBM4	Q9BWF3	364 aa	Known RBP	11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	YIPF2	Q9BWQ6	316 aa		11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	OSBPL10	Q9BXB5	764 aa		11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	ARRDC1-AS1	Q9H2J1	176 aa		11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	FGF21	Q9NSA1	209 aa		11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	GIN1	Q9NXP7	522 aa		11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	NDUFAF4	Q9P032	175 aa		11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	DHCR7	Q9UBM7	475 aa	Known RBP	11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	SERTAD3	Q9UJW9	196 aa		11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	LIPT1	Q9Y234	373 aa		11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	SH3GLB1	Q9Y371	365 aa		11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	UNC13C	Q8NB66	2214 aa		11.5	□□□□□ -0.57
HDLBP-231	ENST00000467435	IGHV5-10-1	A0A0J9YXX1	117 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	MAGEA13P	A6NCF6	341 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	PRAMEF25	A6NGN4	478 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	EIF4E1B	A6NMX2	242 aa	Known RBP	11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	ADAMDEC1	O15204	470 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	HS6ST1	O60243	411 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	DNAJB5	O75953	348 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	SNAP29	O95721	258 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	RECK	O95980	971 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	FES	P07332	822 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	ALOX5	P09917	674 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	THRB	P10828	461 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	MAOA	P21397	527 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	FBL	P22087	321 aa	Known RBP	11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	ALAS2	P22557	587 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	CAPG	P40121	348 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	KCNJ5	P48544	419 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	DUSP3	P51452	185 aa	Predicted RBP	11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	ARHGDIA	P52565	204 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	HSD17B7	P56937	341 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	BTG2	P78543	158 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	SPIB	Q01892	262 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	ACY1	Q03154	408 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	KCNC4	Q03721	635 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	MERTK	Q12866	999 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	DUSP5	Q16690	384 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	DUSP7	Q16829	419 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	EXOSC6	Q5RKV6	272 aa	Known RBP	11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	PRAMEF17	Q5VTA0	474 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	TCEAL6	Q6IPX3	200 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	HEPHL1	Q6MZM0	1159 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	ZC3H14	Q6PJT7	736 aa	Known RBP	11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	TSEN54	Q7Z6J9	526 aa	Known RBP	11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	CARM1	Q86X55	608 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	CDRT4	Q8N9R6	151 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	SLC16A11	Q8NCK7	471 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	APOBEC4	Q8WW27	367 aa	Known RBP	11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	CYGB	Q8WWM9	190 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	TFAP2C	Q92754	450 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	GATA6	Q92908	595 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	TCEAL3	Q969E4	200 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	CTHRC1	Q96CG8	243 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	SLC35A4	Q96G79	324 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	LOXL4	Q96JB6	756 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	ZNF354B	Q96LW1	612 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	RDH12	Q96NR8	316 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	TRNT1	Q96Q11	434 aa	Known RBP	11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	EPYC	Q99645	322 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	PELO	Q9BRX2	385 aa	Known RBP	11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	ALOXE3	Q9BYJ1	711 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	ANKRD60	Q9BZ19	345 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	AMBRA1	Q9C0C7	1298 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	SMURF2	Q9HAU4	748 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	PDP2	Q9P2J9	529 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	CDC14A	Q9UNH5	594 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	TESMIN	Q9Y4I5	508 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	PCDHGA5	Q9Y5G8	931 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	ENPP4	Q9Y6X5	453 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	DSPP	Q9NZW4	1301 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	ASXL3	Q9C0F0	2248 aa		11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	COL27A1	Q8IZC6	1860 aa	Predicted RBP	11.49	□□□□□ -0.57
HDLBP-231	ENST00000467435	FER1L5	A0AVI2	2057 aa		11.48	□□□□□ -0.57
HDLBP-231	ENST00000467435	SPTB	P11277	2137 aa		11.48	□□□□□ -0.57
HDLBP-231	ENST00000467435		A0A1B0GX78	115 aa		11.48	□□□□□ -0.57
HDLBP-231	ENST00000467435		A8MVJ9	347 aa		11.48	□□□□□ -0.57
HDLBP-231	ENST00000467435	KHNYN	O15037	678 aa	Known RBP	11.48	□□□□□ -0.57
HDLBP-231	ENST00000467435	JRK	O75564	520 aa		11.48	□□□□□ -0.57
HDLBP-231	ENST00000467435	CBX7	O95931	251 aa		11.48	□□□□□ -0.57
HDLBP-231	ENST00000467435	ALB	P02768	609 aa		11.48	□□□□□ -0.57
HDLBP-231	ENST00000467435	ALPP	P05187	535 aa		11.48	□□□□□ -0.57
HDLBP-231	ENST00000467435	LYN	P07948	512 aa		11.48	□□□□□ -0.57
HDLBP-231	ENST00000467435	YAP1	P46937	504 aa	Known RBP	11.48	□□□□□ -0.57
HDLBP-231	ENST00000467435	STT3A	P46977	705 aa		11.48	□□□□□ -0.57
HDLBP-231	ENST00000467435	CHN2	P52757	468 aa		11.48	□□□□□ -0.57
HDLBP-231	ENST00000467435	PDX1	P52945	283 aa		11.48	□□□□□ -0.57
HDLBP-231	ENST00000467435	CDH12	P55289	794 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms