RNA–Protein interactions for RNA: ENST00000467081.1

CCNL1-209, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-209	ENST00000467081	DDX28	Q9NUL7	540 aa	Known RBP	4.06	□□□□□ -1.76
CCNL1-209	ENST00000467081	MRTO4	Q9UKD2	239 aa	Known RBP	4.06	□□□□□ -1.76
CCNL1-209	ENST00000467081	CPNE6	O95741	557 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	FCGR3A	P08637	254 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	HSD17B1	P14061	328 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	ARF4	P18085	180 aa	Predicted RBP	4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	ACP1	P24666	158 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	PPP2R1B	P30154	601 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	GPC3	P51654	580 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	BTG3	Q14201	252 aa	Predicted RBP	4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	EMC2	Q15006	297 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	WSCD2	Q2TBF2	565 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	CNPY1	Q3B7I2	92 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	GPAT3	Q53EU6	434 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	IRGC	Q6NXR0	463 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	NEK5	Q6P3R8	708 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	ABRAXAS1	Q6UWZ7	409 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	PAMR1	Q6UXH9	720 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	TMEM26	Q6ZUK4	368 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	ADGRD2	Q7Z7M1	963 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	ZBTB44	Q8NCP5	570 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	CCDC110	Q8TBZ0	833 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	GTSF1	Q8WW33	167 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	WWP1	Q9H0M0	922 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	CXXC4	Q9H2H0	198 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	ELL3	Q9HB65	397 aa	Predicted RBP	4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	ABCC13	Q9NSE7	274 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	MIS18A	Q9NYP9	233 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	TAS2R3	Q9NYW6	316 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	EIF3K	Q9UBQ5	218 aa	Known RBP	4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	SH3BGRL2	Q9UJC5	107 aa		4.05	□□□□□ -1.76
CCNL1-209	ENST00000467081	SH3PXD2B	A1X283	911 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	TMEM89	A2RUT3	159 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	RNF212B	A8MTL3	300 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081		K7EPI3	171 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	SMPD2	O60906	423 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	LRP3	O75074	770 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	GNS	P15586	552 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	CALR	P27797	417 aa	Known RBP	4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	MTIF2	P46199	727 aa	Known RBP	4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	HTD2	P86397	168 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	CCZ1B	P86790	482 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	CCZ1	P86791	482 aa	Predicted RBP	4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	KLHL30	Q0D2K2	578 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	MSLN	Q13421	630 aa	Predicted RBP	4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	MEF2D	Q14814	521 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	TRADD	Q15628	312 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	C14orf28	Q4W4Y0	310 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	NKAIN2	Q5VXU1	208 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	WDR25	Q64LD2	544 aa	Predicted RBP	4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	RAET1G	Q6H3X3	334 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	GALNT17	Q6IS24	598 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	OLFM4	Q6UX06	510 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	UNC5D	Q6UXZ4	953 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	C17orf64	Q86WR6	236 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	RELL2	Q8NC24	303 aa	Predicted RBP	4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	TBCK	Q8TEA7	893 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	KCNK16	Q96T55	309 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	COQ7	Q99807	217 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	SPAG8	Q99932	426 aa	Predicted RBP	4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	TRPV6	Q9H1D0	765 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	IL1RL2	Q9HB29	575 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	ACOXL	Q9NUZ1	547 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	TAS2R16	Q9NYV7	291 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081		Q9UF83	564 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	TEKT2	Q9UIF3	430 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	RNF24	Q9Y225	148 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	AP1M2	Q9Y6Q5	423 aa		4.04	□□□□□ -1.76
CCNL1-209	ENST00000467081	SAP18	O00422	153 aa	Known RBP	4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	ADAM12	O43184	909 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	TRIM16	O95361	564 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	SYNGR4	O95473	234 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	NCF1	P14598	390 aa	Predicted RBP	4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	ZNF19	P17023	458 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	FAS	P25445	335 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	CALML3	P27482	149 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	CCL11	P51671	97 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	GABPA	Q06546	454 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	ANKRD55	Q3KP44	614 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	UNC50	Q53HI1	259 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	HSP90AA5P	Q58FG0	334 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	C12orf60	Q5U649	245 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	RTL6	Q6ICC9	239 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081		Q6ZRG5	221 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	CHDH	Q8NE62	594 aa	Predicted RBP	4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	OR4F5	Q8NH21	305 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	SELENOM	Q8WWX9	145 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	FCGR1B	Q92637	280 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	PNPLA2	Q96AD5	504 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	RAB39B	Q96DA2	213 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	MRPL38	Q96DV4	380 aa	Known RBP	4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	RPGRIP1	Q96KN7	1286 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	B3GALT6	Q96L58	329 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	TMEM231	Q9H6L2	316 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	AMBN	Q9NP70	447 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	IL20RA	Q9UHF4	553 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	PLEKHA6	Q9Y2H5	1048 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	ATG4B	Q9Y4P1	393 aa		4.03	□□□□□ -1.76
CCNL1-209	ENST00000467081	TDRD6	O60522	2096 aa	Known RBP	4.02	□□□□□ -1.77
CCNL1-209	ENST00000467081	FAM205A	Q6ZU69	1335 aa		4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms