RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 SPTA1P02549 2419 aa12.33□□□□□ -0.43
PDCD11-202ENST00000466959 PRAMEF2O60811 474 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 PSMG1O95456 288 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 CLPSP04118 112 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 PPIBP23284 216 aaKnown RBP12.33□□□□□ -0.44
PDCD11-202ENST00000466959 CHI3L1P36222 383 aaPredicted RBP12.33□□□□□ -0.44
PDCD11-202ENST00000466959 SLC37A1P57057 533 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 CDC20Q12834 499 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 BNIP1Q12981 228 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 ART3Q13508 389 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 TP53BP2Q13625 1128 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 SAXO2Q658L1 398 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 RNF111Q6ZNA4 994 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 SZRD1Q7Z422 152 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 SPACA3Q8IXA5 215 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 CLEC4FQ8N1N0 589 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 ZNF321PQ8N8H1 164 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 ZNF615Q8N8J6 731 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 APCDD1LQ8NCL9 501 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 SIMC1Q8NDZ2 872 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 OR52R1Q8NGF1 315 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 M1APQ8TC57 530 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 ZFP90Q8TF47 636 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 THAP4Q8WY91 577 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 LRRC58Q96CX6 371 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 NEURL3Q96EH8 262 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 MS4A4EQ96PG1 132 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 CPPED1Q9BRF8 314 aaPredicted RBP12.33□□□□□ -0.44
PDCD11-202ENST00000466959 OR10A5Q9H207 317 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 ZNF160Q9HCG1 818 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 BCAP29Q9UHQ4 241 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 GMEB1Q9Y692 573 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 MYO18BQ8IUG5 2567 aa12.33□□□□□ -0.44
PDCD11-202ENST00000466959 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 OR6C76A6NM76 312 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 NKX2-8O15522 239 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 EFSO43281 561 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 KRT75O95678 551 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 KRT16P08779 473 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 PRKAR1AP10644 381 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 ICAM2P13598 275 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 EMDP50402 254 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 PRKAG1P54619 331 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 MXRA7P84157 204 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 CAPRIN1Q14444 709 aaKnown RBP12.32□□□□□ -0.44
PDCD11-202ENST00000466959 BTBD16Q32M84 506 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 RUNDC3AQ59EK9 446 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 ATP1A1-AS1Q5TC04 95 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 C8orf82Q6P1X6 216 aaPredicted RBP12.32□□□□□ -0.44
PDCD11-202ENST00000466959 C6orf120Q7Z4R8 191 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 ZSCAN1Q8NBB4 408 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 GIMAP5Q96F15 307 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 AURKBQ96GD4 344 aaPredicted RBP12.32□□□□□ -0.44
PDCD11-202ENST00000466959 SLC35G5Q96KT7 338 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 FER1L6-AS2Q96M78 137 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 ANKRD27Q96NW4 1050 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 HOPXQ9BPY8 73 aaPredicted RBP12.32□□□□□ -0.44
PDCD11-202ENST00000466959 SLC39A3Q9BRY0 314 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 TPT1P8Q9HAU6 139 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 MMP25Q9NPA2 562 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 GPATCH2Q9NW75 528 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 NDE1Q9NXR1 346 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 PRODH2Q9UF12 536 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 ZNF223Q9UK11 482 aaPredicted RBP12.32□□□□□ -0.44
PDCD11-202ENST00000466959 CFL2Q9Y281 166 aa12.32□□□□□ -0.44
PDCD11-202ENST00000466959 HEMK1Q9Y5R4 338 aaPredicted RBP12.32□□□□□ -0.44
PDCD11-202ENST00000466959 C15orf38-AP3S2A0A0A6YYH1 394 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 TRBV11-1A0A0K0K1C0 115 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 B2RBV5 119 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 CLIC1O00299 241 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 HNRNPCL1O60812 293 aaKnown RBP12.31□□□□□ -0.44
PDCD11-202ENST00000466959 ATP5HO75947 161 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 UNC5CO95185 931 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 HMGN2P05204 90 aaKnown RBP12.31□□□□□ -0.44
PDCD11-202ENST00000466959 MAGEA8P43361 318 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 PRIM2P49643 509 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 CLCN2P51788 898 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 AP2B1P63010 937 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 VAC14Q08AM6 782 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 ZNF155Q12901 538 aaPredicted RBP12.31□□□□□ -0.44
PDCD11-202ENST00000466959 DCAF10Q5QP82 559 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 BROXQ5VW32 411 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 NANOGP8Q6NSW7 305 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 MFSD12Q6NUT3 480 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 ZCCHC12Q6PEW1 402 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 HSDL2Q6YN16 418 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 CCDC121Q6ZUS5 278 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 SLC29A4Q7RTT9 530 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 ARPINQ7Z6K5 226 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 C9orf40Q8IXQ3 194 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 OR8J3Q8NGG0 315 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 OR52N2Q8NGI0 321 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 OR8K3Q8NH51 312 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 C16orf52Q8NHV5 167 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 FBXO27Q8NI29 283 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 MIPOL1Q8TD10 442 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 ELP5Q8TE02 316 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 GPATCH1Q9BRR8 931 aaKnown RBP12.31□□□□□ -0.44
PDCD11-202ENST00000466959 ACTRT3Q9BYD9 372 aa12.31□□□□□ -0.44
PDCD11-202ENST00000466959 RAD21L1Q9H4I0 556 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms