RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 KRT16P08779 473 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 ITGAMP11215 1152 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 COX4I1P13073 169 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 ITGA3P26006 1051 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 MAP3K8P41279 467 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 CXADRP78310 365 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 CRB2Q5IJ48 1285 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 C6orf10Q5SRN2 563 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 IRAK1BP1Q5VVH5 260 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 SAXO2Q658L1 398 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 DLEU7Q6UYE1 221 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 RETREG3Q86VR2 466 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 KIF2BQ8N4N8 673 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 CDRT4Q8N9R6 151 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 PCYOX1LQ8NBM8 494 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 SIMC1Q8NDZ2 872 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 MIPOL1Q8TD10 442 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 ADIPOR1Q96A54 375 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 NEURL3Q96EH8 262 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 THOC3Q96J01 351 aaKnown RBP14.09□□□□□ -0.15
NPHP4-205ENST00000466897 BTBD9Q96Q07 612 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 SLC35A5Q9BS91 424 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 LMF2Q9BU23 707 aaKnown RBP14.09□□□□□ -0.15
NPHP4-205ENST00000466897 PRORYQ9H606 182 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 EPS8L2Q9H6S3 715 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 GPATCH2Q9NW75 528 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 TEKT2Q9UIF3 430 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 LAMA5O15230 3695 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 C2orf92A0A1B0GVN3 265 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 TMEM200CA6NKL6 621 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 ANP32DO95626 131 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 HMGN2P05204 90 aaKnown RBP14.08□□□□□ -0.16
NPHP4-205ENST00000466897 DRD5P21918 477 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 PPIBP23284 216 aaKnown RBP14.08□□□□□ -0.16
NPHP4-205ENST00000466897 SOAT1P35610 550 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 SOX11P35716 441 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 PPICP45877 212 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 PRIM2P49643 509 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 TRMT5Q32P41 509 aaKnown RBP14.08□□□□□ -0.16
NPHP4-205ENST00000466897 MMEL1Q495T6 779 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 SPDYE7PQ495Y7 208 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 REP15Q6BDI9 236 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 MFSD12Q6NUT3 480 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 ZNF621Q6ZSS3 439 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 TRPM8Q7Z2W7 1104 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 DHDDSQ86SQ9 333 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 SLC15A4Q8N697 577 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 BRIX1Q8TDN6 353 aaKnown RBP14.08□□□□□ -0.16
NPHP4-205ENST00000466897 DOK4Q8TEW6 326 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 ZFP90Q8TF47 636 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 ROPN1LQ96C74 230 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 ANKRA2Q9H9E1 313 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 FOLH1BQ9HBA9 442 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 SLC6A13Q9NSD5 602 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 MAP10Q9P2G4 905 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 MYOTQ9UBF9 498 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 PCDHB14Q9Y5E9 798 aa14.08□□□□□ -0.16
NPHP4-205ENST00000466897 PCDHGA9Q9Y5G4 932 aaKnown RBP14.08□□□□□ -0.16
NPHP4-205ENST00000466897 TNRC6AQ8NDV7 1962 aaKnown RBP14.07□□□□□ -0.16
NPHP4-205ENST00000466897 LOC100653049A0A140TA62 436 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 FRG2CA6NGY1 282 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 MASP2O00187 686 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 MRASO14807 208 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 TO15178 435 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 ACOX3O15254 700 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 PRKNO60260 465 aaPredicted RBP14.07□□□□□ -0.16
NPHP4-205ENST00000466897 DNAJB5O75953 348 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 KRT34O76011 436 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 KRT75O95678 551 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 MLF1P58340 268 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 CBX1P83916 185 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 PSG6Q00889 435 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 NFYCQ13952 458 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 ZNHIT3Q15649 155 aaPredicted RBP14.07□□□□□ -0.16
NPHP4-205ENST00000466897 HLA-DQA1Q5Y7H0 255 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 CDC73Q6P1J9 531 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 HACD2Q6Y1H2 254 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 DNAJC14Q6Y2X3 702 aaPredicted RBP14.07□□□□□ -0.16
NPHP4-205ENST00000466897 GPR155Q7Z3F1 870 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 C6orf120Q7Z4R8 191 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 RPS19BP1Q86WX3 136 aaKnown RBP14.07□□□□□ -0.16
NPHP4-205ENST00000466897 MSRB3Q8IXL7 192 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 OR5AK3PQ8NH89 298 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 HSPBAP1Q96EW2 488 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 MAGED4Q96JG8 741 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 LCORQ96JN0 433 aaPredicted RBP14.07□□□□□ -0.16
NPHP4-205ENST00000466897 ZNF354BQ96LW1 612 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 STACQ99469 402 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 ITPAQ9BY32 194 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 ACTRT3Q9BYD9 372 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 EFCAB1Q9HAE3 211 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 DUSP22Q9NRW4 184 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 GID8Q9NWU2 228 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 SLC25A37Q9NYZ2 338 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 VAPAQ9P0L0 249 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 TAGLN3Q9UI15 199 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 CORO2BQ9UQ03 480 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 DTX4Q9Y2E6 619 aa14.07□□□□□ -0.16
NPHP4-205ENST00000466897 GPR55Q9Y2T6 319 aaPredicted RBP14.07□□□□□ -0.16
NPHP4-205ENST00000466897 DUXAA6NLW8 204 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms