RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 TAF4BQ92750 862 aa1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 MRPL24Q96A35 216 aaKnown RBP1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 SGF29Q96ES7 293 aa1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 ZNF274Q96GC6 653 aaPredicted RBP1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 CDKN2AIPNLQ96HQ2 116 aa1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 CASD1Q96PB1 797 aa1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 RASL10BQ96S79 203 aa1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 KIR2DL4Q99706 377 aa1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 ZNF559Q9BR84 538 aa1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 KRT23Q9C075 422 aa1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 IL1RL2Q9HB29 575 aa1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 ELL3Q9HB65 397 aaPredicted RBP1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 GPR173Q9NS66 373 aa1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 PNPLA3Q9NST1 481 aa1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 MIS18AQ9NYP9 233 aa1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 KLRF1Q9NZS2 232 aa1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 EPS15L1Q9UBC2 864 aa1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 TMCC3Q9ULS5 477 aa1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 PIN4Q9Y237 131 aaKnown RBP1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 RPH3AQ9Y2J0 694 aaPredicted RBP1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 TDRKHQ9Y2W6 561 aaKnown RBP1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 TEX264Q9Y6I9 313 aa1.76□□□□□ -2.13
GTF3C3-209ENST00000466862 CPLX1O14810 134 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 HSF2BPO75031 334 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 ZNF853P0CG23 659 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 CCDC192P0DO97 292 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 AHCYP23526 432 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 IL2RGP31785 369 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 KIF5BP33176 963 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 MAGEB1P43366 347 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 MTIF2P46199 727 aaKnown RBP1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 RABIFP47224 123 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 CAMLGP49069 296 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 ZNF131P52739 623 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 ATXN3P54252 364 aaPredicted RBP1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 MFAP2P55001 183 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 UCP2P55851 309 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 GMFBP60983 142 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 POLR2FP61218 127 aaKnown RBP1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 GALK2Q01415 458 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 ARHGAP1Q07960 439 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 OVGP1Q12889 678 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 PDK1Q15118 436 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 ACKR1Q16570 336 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 MICAQ29983 383 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 KCTD11Q693B1 232 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 CAPN13Q6MZZ7 669 aaPredicted RBP1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 TIFABQ6ZNK6 161 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 PRSS42Q7Z5A4 293 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 ITIH5Q86UX2 942 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 LAX1Q8IWV1 398 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 GPR65Q8IYL9 337 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 BATF2Q8N1L9 274 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 FBXW8Q8N3Y1 598 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 ARL6IP6Q8N6S5 226 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 DTD2Q96FN9 168 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 CFAP36Q96G28 342 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 FAM111AQ96PZ2 611 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 NAP1L3Q99457 506 aaPredicted RBP1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 RTBDNQ9BSG5 229 aaPredicted RBP1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 SCRT1Q9BWW7 348 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 TEX13AQ9BXU3 409 aaPredicted RBP1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 WWP1Q9H0M0 922 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 NAPBQ9H115 298 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 ABCG4Q9H172 646 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 CXXC4Q9H2H0 198 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 CUEDC2Q9H467 287 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 SYTL2Q9HCH5 934 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 KCNMB3Q9NPA1 279 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 NINJ2Q9NZG7 142 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 HMG20BQ9P0W2 317 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 ACTR3BQ9P1U1 418 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 MAD2L2Q9UI95 211 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 TRMT6Q9UJA5 497 aaKnown RBP1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 KLHL21Q9UJP4 597 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 KCNK6Q9Y257 313 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 EXOC6BQ9Y2D4 811 aa1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 STRAPQ9Y3F4 350 aaKnown RBP1.75□□□□□ -2.13
GTF3C3-209ENST00000466862 CHD4Q14839 1912 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 TRBV2A0A0J9YWF9 115 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 H0YIG0 161 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 LETM1O95202 739 aaPredicted RBP1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 PRAMEF12O95522 483 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 GUCA1CO95843 209 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 HSPB1P04792 205 aaKnown RBP1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 ALOX5P09917 674 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 GHRP10912 638 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 CPA3P15088 417 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 FERP16591 822 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 ARF4P18085 180 aaPredicted RBP1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 UGT1A6P19224 532 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 CCNA2P20248 432 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 IGFBP5P24593 272 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 SFNP31947 248 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 GPC3P51654 580 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 SMSP52788 366 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 HSD17B7P56937 341 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 HTD2P86397 168 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 GAMTQ14353 236 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 EMC2Q15006 297 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms