RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 DNAJB13P59910 316 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 SHC2P98077 582 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 NFE2L1Q14494 772 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 EIF4HQ15056 248 aaKnown RBP8.3□□□□□ -1.08
HPS4-209ENST00000466781 BCL2A1Q16548 175 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 BTBD16Q32M84 506 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 LEG1Q6P5S2 330 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 HS3ST5Q8IZT8 346 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 CMASQ8NFW8 434 aaPredicted RBP8.3□□□□□ -1.08
HPS4-209ENST00000466781 PLEKHO2Q8TD55 490 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 GLYATL2Q8WU03 294 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 RRNAD1Q96FB5 475 aaKnown RBP8.3□□□□□ -1.08
HPS4-209ENST00000466781 MYRFLQ96LU7 910 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 EIF5A2Q9GZV4 153 aaKnown RBP8.3□□□□□ -1.08
HPS4-209ENST00000466781 LMAN1LQ9HAT1 526 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 EXTL2Q9UBQ6 330 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 SH3BGRL2Q9UJC5 107 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 AP1M2Q9Y6Q5 423 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 A0A096LPI6 279 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 FAM155AB1AL88 458 aaPredicted RBP8.3□□□□□ -1.08
HPS4-209ENST00000466781 ADAMTS4O75173 837 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 CER1O95813 267 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 CDK2P24941 298 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 CDH15P55291 814 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 RPA4Q13156 261 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 PTPRCAPQ14761 206 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 STK11Q15831 433 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 LYSMD4Q5XG99 296 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 SMYD5Q6GMV2 418 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 FIGLAQ6QHK4 219 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 MRPL21Q7Z2W9 205 aaKnown RBP8.3□□□□□ -1.08
HPS4-209ENST00000466781 ZBTB8BQ8NAP8 495 aaPredicted RBP8.3□□□□□ -1.08
HPS4-209ENST00000466781 PPP1R35Q8TAP8 253 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 SLC35B2Q8TB61 432 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 UBXN10Q96LJ8 280 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 SYT4Q9H2B2 425 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 SIX4Q9UIU6 781 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 XPNPEP2O43895 674 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 SLC16A8O95907 504 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 ADRB3P13945 408 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 LSSP48449 732 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 RAB11BQ15907 218 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 NTRK2Q16620 822 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 UGT3A2Q3SY77 523 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 GPR157Q5UAW9 335 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 FIGNL1Q6PIW4 674 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 ZNF773Q6PK81 442 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 LARP4Q71RC2 724 aaKnown RBP eCLIP8.3□□□□□ -1.08
HPS4-209ENST00000466781 CEACAM19Q7Z692 300 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 C14orf80Q86SX3 495 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 DCP2Q8IU60 420 aaKnown RBP8.3□□□□□ -1.08
HPS4-209ENST00000466781 LILRB2Q8N423 598 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 GALNT6Q8NCL4 622 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 ZNF382Q96SR6 550 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 BEX2Q9BXY8 128 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 HSD3B7Q9H2F3 369 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 BEX1Q9HBH7 125 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 DNAJB11Q9UBS4 358 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 ACSL6Q9UKU0 697 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 OR1A2Q9Y585 309 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 MT-CO2P00403 227 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 ABOP16442 354 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 CEBPBP17676 345 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 HK3P52790 923 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 MEP1AQ16819 746 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 ZBED5Q49AG3 693 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 SLC39A11Q8N1S5 342 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 SLC5A8Q8N695 610 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 SAMD12Q8N8I0 201 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 CREB3L4Q8TEY5 395 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 SCAMP4Q969E2 229 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 SFXN2Q96NB2 322 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 SULT4A1Q9BR01 284 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 TAS2R1Q9NYW7 299 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 MCTS1Q9ULC4 181 aaKnown RBP8.29□□□□□ -1.08
HPS4-209ENST00000466781 GXYLT2A0PJZ3 443 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 CLCA1A8K7I4 914 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 CSF2P04141 144 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 PROS1P07225 676 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 GGT5P36269 586 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 FADDQ13158 208 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 UGT8Q16880 541 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 EXOC3L2Q2M3D2 409 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 RTL10Q7L3V2 364 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 CCDC71LQ8N9Z2 235 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 OR10T2Q8NGX3 314 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 OR8K5Q8NH50 307 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 OR51A7Q8NH64 312 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 CWH43Q9H720 699 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 NANSQ9NR45 359 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 TBCCD1Q9NVR7 557 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 HAO2Q9NYQ3 351 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 PCDHGA8Q9Y5G5 932 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 MYH7P12883 1935 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 TRBV2A0A0J9YWF9 115 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 ARGFXA6NJG6 315 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 ANKRD30BLA7E2S9 258 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 PABPC4LP0CB38 370 aaKnown RBP8.29□□□□□ -1.08
HPS4-209ENST00000466781 DRD1P21728 446 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 CES4AQ5XG92 561 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms