RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 MAT2BQ9NZL9 334 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 MCM8Q9UJA3 840 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 EDARQ9UNE0 448 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 MAPRE3Q9UPY8 281 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 CSMD1Q96PZ7 3565 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 DNAJC13O75165 2243 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 REM1O75628 298 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 BCAS2O75934 225 aaPredicted RBP16.03■□□□□ 0.16
COL7A1-206ENST00000466591 HPNP05981 417 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 ABCB1P08183 1280 aaPredicted RBP16.03■□□□□ 0.16
COL7A1-206ENST00000466591 IL3P08700 152 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 ASCL1P50553 236 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 HEPACAMQ14CZ8 416 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 ACSF3Q4G176 576 aaPredicted RBP16.03■□□□□ 0.16
COL7A1-206ENST00000466591 WIPI1Q5MNZ9 446 aaPredicted RBP16.03■□□□□ 0.16
COL7A1-206ENST00000466591 TCHHL1Q5QJ38 904 aaPredicted RBP16.03■□□□□ 0.16
COL7A1-206ENST00000466591 ZNF678Q5SXM1 525 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 TIGD3Q6B0B8 471 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 YRDCQ86U90 279 aaKnown RBP16.03■□□□□ 0.16
COL7A1-206ENST00000466591 CNPY4Q8N129 248 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 CCNYL1Q8N7R7 359 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 GBP7Q8N8V2 638 aaPredicted RBP16.03■□□□□ 0.16
COL7A1-206ENST00000466591 ACBD4Q8NC06 268 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 RDH11Q8TC12 318 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 ABTB1Q969K4 478 aaPredicted RBP16.03■□□□□ 0.16
COL7A1-206ENST00000466591 TMEM237Q96Q45 408 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 BBS4Q96RK4 519 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 ZNF382Q96SR6 550 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 C1QTNF3Q9BXJ4 246 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 DNAJB12Q9NXW2 375 aaKnown RBP16.03■□□□□ 0.16
COL7A1-206ENST00000466591 TMEM216Q9P0N5 145 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 PSMC3IPQ9P2W1 217 aaPredicted RBP16.03■□□□□ 0.16
COL7A1-206ENST00000466591 TBK1Q9UHD2 729 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 DLGAP4Q9Y2H0 992 aa16.03■□□□□ 0.16
COL7A1-206ENST00000466591 A0A1B0GTL3 188 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 PRAMEF25A6NGN4 478 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 EEF1E1-BLOC1S5C9J1V9 151 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 H0Y3Z8 333 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 EEF1E1O43324 174 aaKnown RBP16.02■□□□□ 0.16
COL7A1-206ENST00000466591 RIPK2O43353 540 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 EPPINO95925 133 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 ENO1P06733 434 aaKnown RBP16.02■□□□□ 0.16
COL7A1-206ENST00000466591 GSTA1P08263 222 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 CYP4B1P13584 511 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 DRD2P14416 443 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 PCSK2P16519 638 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 POU3F2P20265 443 aaPredicted RBP16.02■□□□□ 0.16
COL7A1-206ENST00000466591 IMPDH1P20839 514 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 ECHS1P30084 290 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 MRPS35P82673 323 aaKnown RBP16.02■□□□□ 0.16
COL7A1-206ENST00000466591 CRYZQ08257 329 aaKnown RBP16.02■□□□□ 0.16
COL7A1-206ENST00000466591 LCP2Q13094 533 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 LTB4RQ15722 352 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 EIPR1Q53HC9 387 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 CFAP157Q5JU67 520 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 ENPP6Q6UWR7 440 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 LIX1LQ8IVB5 337 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 CCDC116Q8IYX3 515 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 CCDC63Q8NA47 563 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 TNIP2Q8NFZ5 429 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 GOT1L1Q8NHS2 421 aaPredicted RBP16.02■□□□□ 0.16
COL7A1-206ENST00000466591 CCDC126Q96EE4 140 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 POLDIP3Q9BY77 421 aaKnown RBP16.02■□□□□ 0.16
COL7A1-206ENST00000466591 MIEF1Q9NQG6 463 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 CES1P1Q9UKY3 287 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 DTX4Q9Y2E6 619 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 OR10H1Q9Y4A9 318 aa16.02■□□□□ 0.16
COL7A1-206ENST00000466591 C2orf72A6NCS6 295 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 DLX3O60479 287 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 RHOXF2BP0C7M4 288 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 PYGBP11216 843 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 CD1EP15812 388 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 MPIP34949 423 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 PPICP45877 212 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 DGKQP52824 942 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 ART1P52961 327 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 PKNOX1P55347 436 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 WNT3P56703 355 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 SNTB1Q13884 538 aaKnown RBP16.01■□□□□ 0.15
COL7A1-206ENST00000466591 TRMT12Q53H54 448 aaKnown RBP16.01■□□□□ 0.15
COL7A1-206ENST00000466591 UNC50Q53HI1 259 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 TIFABQ6ZNK6 161 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 FAM83FQ8NEG4 500 aaPredicted RBP16.01■□□□□ 0.15
COL7A1-206ENST00000466591 OR9A2Q8NGT5 310 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 ACMSDQ8TDX5 336 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 TMBIM1Q969X1 311 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 CNRIP1Q96F85 164 aaPredicted RBP16.01■□□□□ 0.15
COL7A1-206ENST00000466591 COL21A1Q96P44 957 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 RHOXF2Q9BQY4 288 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 EBPLQ9BY08 206 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 GALNT9Q9HCQ5 603 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 MID1IP1Q9NPA3 183 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 SERHLQ9NQF3 203 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 DCDC2Q9UHG0 476 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 DKKL1Q9UK85 242 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 L3MBTL1Q9Y468 752 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 HCFC1P51610 2035 aa16.01■□□□□ 0.15
COL7A1-206ENST00000466591 FRG2CA6NGY1 282 aa16■□□□□ 0.15
COL7A1-206ENST00000466591 ABCB7O75027 752 aa16■□□□□ 0.15
COL7A1-206ENST00000466591 ICOSLGO75144 302 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms