RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 GOT2P00505 430 aaKnown RBP1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 MT-ATP6P00846 226 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 TGFAP01135 160 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 SNRPCP09234 159 aaKnown RBP1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 FAM200BP0CF97 657 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 CCDC192P0DO97 292 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 CYP11B1P15538 503 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 UCP1P25874 307 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 TMOD1P28289 359 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 PRDX6P30041 224 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 CD86P42081 329 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 ASMTP46597 345 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 SLC8A3P57103 927 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 GABPB1Q06547 395 aaPredicted RBP1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 ZNF33BQ06732 778 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 SMC1AQ14683 1233 aaKnown RBP1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 TGIF1Q15583 401 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 TMEM44Q2T9K0 475 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 C15orf32Q32M92 178 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 CCDC40Q4G0X9 1142 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 LIPKQ5VXJ0 399 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 FAM219BQ5XKK7 198 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 SEL1L3Q68CR1 1132 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 CWC27Q6UX04 472 aaKnown RBP1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 ADAMTSL5Q6ZMM2 481 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 ZNF600Q6ZNG1 722 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 RBM43Q6ZSC3 357 aaKnown RBP1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 GOLGA7Q7Z5G4 137 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 SYVN1Q86TM6 617 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 SLC25A42Q86VD7 318 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 VPS36Q86VN1 386 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 ZSCAN30Q86W11 494 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 CDC20BQ86Y33 519 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 CCDC36Q8IYA8 594 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 ARFGAP2Q8N6H7 521 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 GPATCH11Q8N954 259 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 SUMF1Q8NBK3 374 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 LEMD2Q8NC56 503 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 NFAM1Q8NET5 270 aaPredicted RBP1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 OR4Q3Q8NH05 313 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 FNDC8Q8TC99 324 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 CRYGNQ8WXF5 182 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 PHYHIPQ92561 330 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 TOMM40LQ969M1 308 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 ADIPOR1Q96A54 375 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 BIRC7Q96CA5 298 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 FAM173AQ9BQD7 235 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 RPP25Q9BUL9 199 aaKnown RBP1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 WRAP53Q9BUR4 548 aaKnown RBP1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 RBM24Q9BX46 236 aaKnown RBP1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 PUS3Q9BZE2 481 aaKnown RBP1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 UBXN6Q9BZV1 441 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 TRIM9Q9C026 710 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 ZBP1Q9H171 429 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 ABCG4Q9H172 646 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 C1orf21Q9H246 121 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 TSPY26PQ9H489 355 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 ECT2Q9H8V3 914 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 SP140LQ9H930 580 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 SOHLH2Q9NX45 425 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 GPR83Q9NYM4 423 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 RCOR3Q9P2K3 495 aaPredicted RBP1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 SEC14L4Q9UDX3 406 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 MGAT4AQ9UM21 535 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 RNF24Q9Y225 148 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 MMP24Q9Y5R2 645 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 POGZQ7Z3K3 1410 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 PARD3Q8TEW0 1356 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 FER1L5A0AVI2 2057 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 KRT87PA6NCN2 255 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 C19orf81C9J6K1 198 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 NPIPA2E9PIF3 369 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 F8WDY8 70 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 PDXKO00764 312 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 EI24O14681 340 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 RASGRF2O14827 1237 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 MCF2LO15068 1137 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 TM9SF1O15321 606 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 PHF1O43189 567 aaPredicted RBP1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 GPRIN2O60269 458 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 RANBP6O60518 1105 aaKnown RBP1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 SRPX2O60687 465 aaPredicted RBP1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 ZNF354AO60765 605 aaPredicted RBP1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 RAMP1O60894 148 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 SH3BGRLO75368 114 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 PDE5AO76074 875 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 KBTBD11O94819 623 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 PTBP3O95758 552 aaKnown RBP1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 IGSF6O95976 241 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 PROS1P07225 676 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 ACADSP16219 412 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 MAPK3P27361 379 aaPredicted RBP1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 PPP2R1BP30154 601 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 CCND2P30279 289 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 PRDX2P32119 198 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 OR1D4P47884 311 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 MFAP2P55001 183 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 MRPS6P82932 125 aaKnown RBP1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 MYBPC1Q00872 1141 aa1.46□□□□□ -2.18
NUCKS1-202ENST00000464938 ZP4Q12836 540 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms