RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 PSD4Q8NDX1 1056 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 OR52R1Q8NGF1 315 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 C16orf52Q8NHV5 167 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 CTHRC1Q96CG8 243 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 MTERF3Q96E29 417 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 FRMD6Q96NE9 622 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 EBF4Q9BQW3 602 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 TSPAN10Q9H1Z9 355 aaPredicted RBP15.73■□□□□ 0.11
VPS52-215ENST00000464425 REEP4Q9H6H4 257 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 ZNF639Q9UID6 485 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 DTX4Q9Y2E6 619 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 KLF13Q9Y2Y9 288 aaPredicted RBP15.73■□□□□ 0.11
VPS52-215ENST00000464425 UBR5O95071 2799 aaPredicted RBP15.72■□□□□ 0.11
VPS52-215ENST00000464425 GMNCA6NCL1 334 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 ASPDHA6ND91 283 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 MYO1GB0I1T2 1018 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 G3V3Y1 287 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 KLRC4-KLRK1H3BQV0 150 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 NME6O75414 186 aaPredicted RBP15.72■□□□□ 0.11
VPS52-215ENST00000464425 CBX7O95931 251 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 ALDOCP09972 364 aaKnown RBP15.72■□□□□ 0.11
VPS52-215ENST00000464425 IDO1P14902 403 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 PRPS1L1P21108 318 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 RPL3P39023 403 aaKnown RBP15.72■□□□□ 0.11
VPS52-215ENST00000464425 TDGF1P3P51864 188 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 NCBP2P52298 156 aaKnown RBP eCLIP15.72■□□□□ 0.112e-6■■□□□ 13
VPS52-215ENST00000464425 CLDN8P56748 225 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 KCNK10P57789 538 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 GNGT1P63211 74 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 IRX1P78414 480 aaPredicted RBP15.72■□□□□ 0.11
VPS52-215ENST00000464425 ALDH6A1Q02252 535 aaKnown RBP15.72■□□□□ 0.11
VPS52-215ENST00000464425 PDE7AQ13946 482 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 PTGR1Q14914 329 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 CEBPEQ15744 281 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 GSTA3Q16772 222 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 ZNF791Q3KP31 576 aaPredicted RBP15.72■□□□□ 0.11
VPS52-215ENST00000464425 RNFT1Q5M7Z0 435 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 CGB2Q6NT52 195 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 LYPD8Q6UX82 237 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 RTL4Q6ZR62 310 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 R3HCC1LQ7Z5L2 792 aaKnown RBP15.72■□□□□ 0.11
VPS52-215ENST00000464425 RIMKLAQ8IXN7 391 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 TAGAPQ8N103 731 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 SLC15A4Q8N697 577 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 ZNF441Q8N8Z8 693 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 OR5M3Q8NGP4 307 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 RFWD2Q8NHY2 731 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 ADIPOR1Q96A54 375 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 DEPPQ9NTK1 212 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 AIG1Q9NVV5 245 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 KLHL14Q9P2G3 628 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 DCTN4Q9UJW0 460 aa15.72■□□□□ 0.11
VPS52-215ENST00000464425 A0A0G2JMM0 328 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 A0A1W2PPB8 328 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 A0A1W2PRS3 328 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 KIR3DP1A8MWS1 328 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 NPIPA5E9PKD4 350 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 UBDO15205 165 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 CCL3P10147 92 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 DDX5P17844 614 aaKnown RBP15.71■□□□□ 0.11
VPS52-215ENST00000464425 GPX3P22352 226 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 SRSF1Q07955 248 aaKnown RBP eCLIP15.71■□□□□ 0.11
VPS52-215ENST00000464425 NNATQ16517 81 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 METTL21CQ5VZV1 264 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 GFRALQ6UXV0 394 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 FAM13CQ8NE31 585 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 ZNF675Q8TD23 568 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 TP53INP1Q96A56 240 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 SPACA9Q96E40 222 aaPredicted RBP15.71■□□□□ 0.11
VPS52-215ENST00000464425 SGCZQ96LD1 299 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 ITPAQ9BY32 194 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 SH3BP4Q9P0V3 963 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 SEC14L3Q9UDX4 400 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 ATP6V1HQ9UI12 483 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 NPIPA1Q9UND3 350 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 CFL2Q9Y281 166 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 GPR45Q9Y5Y3 372 aa15.71■□□□□ 0.11
VPS52-215ENST00000464425 ZGRF1Q86YA3 2104 aa15.7■□□□□ 0.1
VPS52-215ENST00000464425 A0A0G2JND7 137 aa15.7■□□□□ 0.1
VPS52-215ENST00000464425 PINLYPA6NC86 204 aa15.7■□□□□ 0.1
VPS52-215ENST00000464425 ANKRD28O15084 1053 aa15.7■□□□□ 0.1
VPS52-215ENST00000464425 UNC5CO95185 931 aa15.7■□□□□ 0.1
VPS52-215ENST00000464425 FBXO45P0C2W1 286 aa15.7■□□□□ 0.1
VPS52-215ENST00000464425 NTSP30990 170 aa15.7■□□□□ 0.1
VPS52-215ENST00000464425 HPCAL1P37235 193 aa15.7■□□□□ 0.1
VPS52-215ENST00000464425 MRPL19P49406 292 aaKnown RBP15.7■□□□□ 0.1
VPS52-215ENST00000464425 SEC24CP53992 1094 aa15.7■□□□□ 0.1
VPS52-215ENST00000464425 FHL5Q5TD97 284 aa15.7■□□□□ 0.1
VPS52-215ENST00000464425 PRR22Q8IZ63 422 aa15.7■□□□□ 0.1
VPS52-215ENST00000464425 NATD1Q8N6N6 113 aa15.7■□□□□ 0.1
VPS52-215ENST00000464425 GOLM1Q8NBJ4 401 aa15.7■□□□□ 0.1
VPS52-215ENST00000464425 OR7G2Q8NG99 324 aa15.7■□□□□ 0.1
VPS52-215ENST00000464425 OR10G3Q8NGC4 313 aa15.7■□□□□ 0.1
VPS52-215ENST00000464425 CIDECQ96AQ7 238 aaPredicted RBP15.7■□□□□ 0.1
VPS52-215ENST00000464425 PPCDCQ96CD2 204 aa15.7■□□□□ 0.1
VPS52-215ENST00000464425 THOC1Q96FV9 657 aaKnown RBP15.7■□□□□ 0.1
VPS52-215ENST00000464425 PRPF18Q99633 342 aaKnown RBP15.7■□□□□ 0.1
VPS52-215ENST00000464425 NXF5Q9H1B4 397 aaKnown RBP15.7■□□□□ 0.1
VPS52-215ENST00000464425 GLIPR2Q9H4G4 154 aa15.7■□□□□ 0.1
VPS52-215ENST00000464425 SDR39U1Q9NRG7 319 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms