RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 NUCB2P80303 420 aa2.58□□□□□ -2
HPS3-203ENST00000460822 NFATC2Q13469 925 aa2.58□□□□□ -2
HPS3-203ENST00000460822 KLF5Q13887 457 aaPredicted RBP2.58□□□□□ -2
HPS3-203ENST00000460822 IDI1Q13907 227 aa2.58□□□□□ -2
HPS3-203ENST00000460822 TRIP10Q15642 601 aa2.58□□□□□ -2
HPS3-203ENST00000460822 DCAF12Q5T6F0 453 aa2.58□□□□□ -2
HPS3-203ENST00000460822 NADSYN1Q6IA69 706 aa2.58□□□□□ -2
HPS3-203ENST00000460822 NIPAL3Q6P499 406 aa2.58□□□□□ -2
HPS3-203ENST00000460822 SLC39A4Q6P5W5 647 aa2.58□□□□□ -2
HPS3-203ENST00000460822 CBLN3Q6UW01 205 aa2.58□□□□□ -2
HPS3-203ENST00000460822 TRPT1Q86TN4 253 aaKnown RBP2.58□□□□□ -2
HPS3-203ENST00000460822 C17orf64Q86WR6 236 aa2.58□□□□□ -2
HPS3-203ENST00000460822 FAM131BQ86XD5 332 aa2.58□□□□□ -2
HPS3-203ENST00000460822 DND1Q8IYX4 353 aaKnown RBP2.58□□□□□ -2
HPS3-203ENST00000460822 BBS5Q8N3I7 341 aa2.58□□□□□ -2
HPS3-203ENST00000460822 RELL2Q8NC24 303 aaPredicted RBP2.58□□□□□ -2
HPS3-203ENST00000460822 AGR3Q8TD06 166 aa2.58□□□□□ -2
HPS3-203ENST00000460822 TM9SF4Q92544 642 aa2.58□□□□□ -2
HPS3-203ENST00000460822 ZNF75CPQ92670 426 aaPredicted RBP2.58□□□□□ -2
HPS3-203ENST00000460822 MRPL24Q96A35 216 aaKnown RBP2.58□□□□□ -2
HPS3-203ENST00000460822 SENP8Q96LD8 212 aa2.58□□□□□ -2
HPS3-203ENST00000460822 LURAP1Q96LR2 239 aa2.58□□□□□ -2
HPS3-203ENST00000460822 C2orf48Q96LS8 159 aa2.58□□□□□ -2
HPS3-203ENST00000460822 DUX5Q96PT3 197 aa2.58□□□□□ -2
HPS3-203ENST00000460822 VPS35Q96QK1 796 aa2.58□□□□□ -2
HPS3-203ENST00000460822 KRT12Q99456 494 aa2.58□□□□□ -2
HPS3-203ENST00000460822 NFKBIZQ9BYH8 718 aa2.58□□□□□ -2
HPS3-203ENST00000460822 FAM124BQ9H5Z6 455 aaPredicted RBP2.58□□□□□ -2
HPS3-203ENST00000460822 ATP13A3Q9H7F0 1226 aa2.58□□□□□ -2
HPS3-203ENST00000460822 YY1AP1Q9H869 796 aa2.58□□□□□ -2
HPS3-203ENST00000460822 GLRX2Q9NS18 164 aa2.58□□□□□ -2
HPS3-203ENST00000460822 GDAP2Q9NXN4 497 aa2.58□□□□□ -2
HPS3-203ENST00000460822 ZNF490Q9ULM2 529 aaPredicted RBP2.58□□□□□ -2
HPS3-203ENST00000460822 SELENOKQ9Y6D0 94 aa2.58□□□□□ -2
HPS3-203ENST00000460822 KNDC1Q76NI1 1749 aa2.58□□□□□ -2
HPS3-203ENST00000460822 MROH2AA6NES4 1674 aa2.58□□□□□ -2
HPS3-203ENST00000460822 DEPDC5O75140 1603 aa2.58□□□□□ -2
HPS3-203ENST00000460822 NEURL4Q96JN8 1562 aa2.58□□□□□ -2
HPS3-203ENST00000460822 NOS1P29475 1434 aa2.58□□□□□ -2
HPS3-203ENST00000460822 YEATS2Q9ULM3 1422 aa2.58□□□□□ -2
HPS3-203ENST00000460822 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.58□□□□□ -2
HPS3-203ENST00000460822 RNF222A6NCQ9 220 aa2.58□□□□□ -2
HPS3-203ENST00000460822 MFSD2BA6NFX1 497 aa2.58□□□□□ -2
HPS3-203ENST00000460822 ASB14A6NK59 587 aa2.58□□□□□ -2
HPS3-203ENST00000460822 SDHDO14521 159 aa2.58□□□□□ -2
HPS3-203ENST00000460822 PRRG1O14668 218 aa2.58□□□□□ -2
HPS3-203ENST00000460822 SH2D1BO14796 132 aa2.58□□□□□ -2
HPS3-203ENST00000460822 KLF11O14901 512 aa2.58□□□□□ -2
HPS3-203ENST00000460822 B4GALT2O60909 372 aa2.58□□□□□ -2
HPS3-203ENST00000460822 SNNO75324 88 aaPredicted RBP2.58□□□□□ -2
HPS3-203ENST00000460822 CDC123O75794 336 aaPredicted RBP2.58□□□□□ -2
HPS3-203ENST00000460822 CIB2O75838 187 aa2.58□□□□□ -2
HPS3-203ENST00000460822 ANXA9O76027 345 aa2.58□□□□□ -2
HPS3-203ENST00000460822 UFL1O94874 794 aa2.58□□□□□ -2
HPS3-203ENST00000460822 SERPINA3P01011 423 aa2.58□□□□□ -2
HPS3-203ENST00000460822 VTNP04004 478 aa2.58□□□□□ -2
HPS3-203ENST00000460822 CEBPBP17676 345 aa2.58□□□□□ -2
HPS3-203ENST00000460822 CCR1P32246 355 aa2.58□□□□□ -2
HPS3-203ENST00000460822 CHI3L1P36222 383 aaPredicted RBP2.58□□□□□ -2
HPS3-203ENST00000460822 TNNT2P45379 298 aaPredicted RBP2.58□□□□□ -2
HPS3-203ENST00000460822 CBX1P83916 185 aa2.58□□□□□ -2
HPS3-203ENST00000460822 DRP2Q13474 957 aa2.58□□□□□ -2
HPS3-203ENST00000460822 P2RY14Q15391 338 aa2.58□□□□□ -2
HPS3-203ENST00000460822 POM121L1PQ3SYA9 428 aa2.58□□□□□ -2
HPS3-203ENST00000460822 GTDC1Q4AE62 458 aa2.58□□□□□ -2
HPS3-203ENST00000460822 FAM106AQ4KMX7 169 aa2.58□□□□□ -2
HPS3-203ENST00000460822 CAVIN4Q5BKX8 364 aa2.58□□□□□ -2
HPS3-203ENST00000460822 Q6ZRG5 221 aa2.58□□□□□ -2
HPS3-203ENST00000460822 C9orf139Q6ZV77 190 aa2.58□□□□□ -2
HPS3-203ENST00000460822 SH2D5Q6ZV89 423 aa2.58□□□□□ -2
HPS3-203ENST00000460822 Q6ZVQ6 151 aa2.58□□□□□ -2
HPS3-203ENST00000460822 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
HPS3-203ENST00000460822 ITIH5Q86UX2 942 aa2.58□□□□□ -2
HPS3-203ENST00000460822 LACC1Q8IV20 430 aa2.58□□□□□ -2
HPS3-203ENST00000460822 MARVELD2Q8N4S9 558 aa2.58□□□□□ -2
HPS3-203ENST00000460822 STPG4Q8N801 248 aa2.58□□□□□ -2
HPS3-203ENST00000460822 MLKLQ8NB16 471 aa2.58□□□□□ -2
HPS3-203ENST00000460822 POC1AQ8NBT0 407 aa2.58□□□□□ -2
HPS3-203ENST00000460822 BHLHE23Q8NDY6 225 aa2.58□□□□□ -2
HPS3-203ENST00000460822 KLHDC9Q8NEP7 349 aa2.58□□□□□ -2
HPS3-203ENST00000460822 ZNF397Q8NF99 534 aaPredicted RBP2.58□□□□□ -2
HPS3-203ENST00000460822 C8orf46Q8TAG6 207 aa2.58□□□□□ -2
HPS3-203ENST00000460822 GOLGA5Q8TBA6 731 aa2.58□□□□□ -2
HPS3-203ENST00000460822 GIPC3Q8TF64 312 aa2.58□□□□□ -2
HPS3-203ENST00000460822 GATAD1Q8WUU5 269 aa2.58□□□□□ -2
HPS3-203ENST00000460822 DYRK2Q92630 601 aa2.58□□□□□ -2
HPS3-203ENST00000460822 NT5C3BQ969T7 300 aa2.58□□□□□ -2
HPS3-203ENST00000460822 GIMAP5Q96F15 307 aa2.58□□□□□ -2
HPS3-203ENST00000460822 SLC41A3Q96GZ6 507 aa2.58□□□□□ -2
HPS3-203ENST00000460822 PIWIL1Q96J94 861 aaKnown RBP2.58□□□□□ -2
HPS3-203ENST00000460822 ACCSQ96QU6 501 aa2.58□□□□□ -2
HPS3-203ENST00000460822 PLIN2Q99541 437 aa2.58□□□□□ -2
HPS3-203ENST00000460822 NKX3-1Q99801 234 aaPredicted RBP2.58□□□□□ -2
HPS3-203ENST00000460822 NDUFAF3Q9BU61 184 aa2.58□□□□□ -2
HPS3-203ENST00000460822 TDRD1Q9BXT4 1180 aaKnown RBP2.58□□□□□ -2
HPS3-203ENST00000460822 FNDC4Q9H6D8 234 aaPredicted RBP2.58□□□□□ -2
HPS3-203ENST00000460822 CRLF2Q9HC73 371 aa2.58□□□□□ -2
HPS3-203ENST00000460822 UBE2TQ9NPD8 197 aaPredicted RBP2.58□□□□□ -2
HPS3-203ENST00000460822 MAN2C1Q9NTJ4 1040 aa2.58□□□□□ -2
HPS3-203ENST00000460822 HYPKQ9NX55 129 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms