RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 OR9A2Q8NGT5 310 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 SPPL2AQ8TCT8 520 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 PHF10Q8WUB8 498 aaKnown RBP21.13■□□□□ 0.97
PTPN4-208ENST00000460289 MECRQ9BV79 373 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 STMN4Q9H169 189 aaPredicted RBP21.13■□□□□ 0.97
PTPN4-208ENST00000460289 LRTM1Q9HBL6 345 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 PROK2Q9HC23 129 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 B4GALT7Q9UBV7 327 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 TRAF6Q9Y4K3 522 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 DNAJC15Q9Y5T4 150 aa21.13■□□□□ 0.97
PTPN4-208ENST00000460289 KLF2Q9Y5W3 355 aaPredicted RBP21.13■□□□□ 0.97
PTPN4-208ENST00000460289 A0A1B0GVC2 190 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 ATP6AP2A0A1C7CYW4 349 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 MYO1GB0I1T2 1018 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 TYROBPO43914 113 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 SUSD5O60279 629 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 PPM1BO75688 479 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 ATP6AP2O75787 350 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 SLITRK5O94991 958 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 CREB1P16220 341 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 ADORA2A-AS1P86434 159 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 ZNF844Q08AG5 666 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 Q6ZSR9 355 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 NUP54Q7Z3B4 507 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 SLC34A3Q8N130 599 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 SIMC1Q8NDZ2 872 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 KAT2AQ92830 837 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 JSRP1Q96MG2 331 aaPredicted RBP21.12■□□□□ 0.97
PTPN4-208ENST00000460289 ANGPTL4Q9BY76 406 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 TP63Q9H3D4 680 aaPredicted RBP21.12■□□□□ 0.97
PTPN4-208ENST00000460289 LDAHQ9H6V9 325 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 QPCTLQ9NXS2 382 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 EML6Q6ZMW3 1958 aa21.12■□□□□ 0.97
PTPN4-208ENST00000460289 CTIFO43310 598 aaKnown RBP21.11■□□□□ 0.97
PTPN4-208ENST00000460289 PLOD3O60568 738 aa21.11■□□□□ 0.97
PTPN4-208ENST00000460289 CHRNGP07510 517 aa21.11■□□□□ 0.97
PTPN4-208ENST00000460289 BPGMP07738 259 aa21.11■□□□□ 0.97
PTPN4-208ENST00000460289 ABCB1P08183 1280 aaPredicted RBP21.11■□□□□ 0.97
PTPN4-208ENST00000460289 LINC00032P0C843 101 aa21.11■□□□□ 0.97
PTPN4-208ENST00000460289 PSPHP78330 225 aa21.11■□□□□ 0.97
PTPN4-208ENST00000460289 TRILQ7L0X0 811 aa21.11■□□□□ 0.97
PTPN4-208ENST00000460289 CROCCP2Q86T23 111 aa21.11■□□□□ 0.97
PTPN4-208ENST00000460289 PACS2Q86VP3 889 aa21.11■□□□□ 0.97
PTPN4-208ENST00000460289 PRR22Q8IZ63 422 aa21.11■□□□□ 0.97
PTPN4-208ENST00000460289 TAS2R9Q9NYW1 312 aa21.11■□□□□ 0.97
PTPN4-208ENST00000460289 GPR55Q9Y2T6 319 aaPredicted RBP21.11■□□□□ 0.97
PTPN4-208ENST00000460289 TMED5Q9Y3A6 229 aa21.11■□□□□ 0.97
PTPN4-208ENST00000460289 PTGDR2Q9Y5Y4 395 aa21.11■□□□□ 0.97
PTPN4-208ENST00000460289 FRG2CA6NGY1 282 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 PRSS44E7EML9 344 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 NPIPA2E9PIF3 369 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 NPIPA3F8WFD2 350 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 ADAM10O14672 748 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 BCKDKO14874 412 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 TO15178 435 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 HCN1O60741 890 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 TRIM3O75382 744 aaPredicted RBP21.1■□□□□ 0.97
PTPN4-208ENST00000460289 NTSP30990 170 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 DCTP40126 519 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 MAN2A2P49641 1150 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 NCBP2P52298 156 aaKnown RBP eCLIP21.1■□□□□ 0.97
PTPN4-208ENST00000460289 PLCXD2Q0VAA5 305 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 NNATQ16517 81 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 TMEM211Q6ICI0 200 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 C3P1Q6ZMU1 363 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 DDIASQ8IXT1 998 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 ZNF597Q96LX8 424 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 RILPQ96NA2 401 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 DMRTA2Q96SC8 542 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 TUBB1Q9H4B7 451 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 EXO5Q9H790 373 aa21.1■□□□□ 0.97
PTPN4-208ENST00000460289 ZNF703Q9H7S9 590 aaPredicted RBP21.1■□□□□ 0.97
PTPN4-208ENST00000460289 SSU72Q9NP77 194 aaKnown RBP21.1■□□□□ 0.97
PTPN4-208ENST00000460289 TRGV5A0A0B4J1U4 118 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 AQP7O14520 342 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 LRATO95237 230 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 CELA3AP09093 270 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 RFPL3SP0C7P2 107 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 CASP3P42574 277 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 ETV4P43268 484 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 UGT3A2Q3SY77 523 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 GXYLT1Q4G148 440 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 SH2D4BQ5SQS7 431 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 SP5Q6BEB4 398 aaPredicted RBP21.09■□□□□ 0.97
PTPN4-208ENST00000460289 ZCCHC23Q6ZST2 131 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 OR2T11Q8NH01 316 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 TWIST2Q8WVJ9 160 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 SARAFQ96BY9 339 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 OMA1Q96E52 524 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 BTBD9Q96Q07 612 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 CCT7Q99832 543 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 ANKRA2Q9H9E1 313 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 ACKR4Q9NPB9 350 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 EXO1Q9UQ84 846 aaKnown RBP21.09■□□□□ 0.97
PTPN4-208ENST00000460289 LIPGQ9Y5X9 500 aa21.09■□□□□ 0.97
PTPN4-208ENST00000460289 A0A087WV62 115 aa21.08■□□□□ 0.97
PTPN4-208ENST00000460289 LRRC3CA6NJW4 275 aa21.08■□□□□ 0.97
PTPN4-208ENST00000460289 LSM1O15116 133 aaKnown RBP21.08■□□□□ 0.97
PTPN4-208ENST00000460289 JUNP05412 331 aaKnown RBP21.08■□□□□ 0.97
PTPN4-208ENST00000460289 TACR1P25103 407 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms