RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 TRAPPC13A5PLN9 417 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 PRKYO43930 277 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 F11P03951 625 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 CSN2P05814 226 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 MTHFD2P13995 350 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 GJA8P48165 433 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 FBXO42Q6P3S6 717 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 ZNF431Q8TF32 576 aaPredicted RBP14.01□□□□□ -0.17
PTPRU-205ENST00000460170 SGTBQ96EQ0 304 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 DNMT3AQ9Y6K1 912 aaPredicted RBP14.01□□□□□ -0.17
PTPRU-205ENST00000460170 FUOMA2VDF0 154 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 HCRTR2O43614 444 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 IGLV3-25P01717 112 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 HSD11B1P28845 292 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 MRPL43Q8N983 215 aaKnown RBP14□□□□□ -0.17
PTPRU-205ENST00000460170 TMIEQ8NEW7 156 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 OR2A12Q8NGT7 310 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 SLC41A3Q96GZ6 507 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 KATNBL1Q9H079 304 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 OR52A4PA6NMU1 304 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 SOX1O00570 391 aaPredicted RBP14□□□□□ -0.17
PTPRU-205ENST00000460170 PTTG1O95997 202 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 MMP2P08253 660 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 ACVR1BP36896 505 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 HBA1P69905 142 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 POU4F2Q12837 409 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 ARHGAP11AQ6P4F7 1023 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 RTN4RL1Q86UN2 441 aaPredicted RBP14□□□□□ -0.17
PTPRU-205ENST00000460170 IGFN1Q86VF2 1251 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 ANKK1Q8NFD2 765 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 OR5M3Q8NGP4 307 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 MYLIPQ8WY64 445 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 CPNE5Q9HCH3 593 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 ABCD2Q9UBJ2 740 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 H0YIV9 168 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 HMGN2P05204 90 aaKnown RBP14□□□□□ -0.17
PTPRU-205ENST00000460170 MAZP56270 477 aaKnown RBP14□□□□□ -0.17
PTPRU-205ENST00000460170 MAPK14Q16539 360 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 SLC5A12Q1EHB4 618 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 ZNF101Q8IZC7 436 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 DEFB119Q8N690 84 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 L3MBTL4Q8NA19 623 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 B3GNT7Q8NFL0 401 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 TOX2Q96NM4 488 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 PITHD1Q9GZP4 211 aaPredicted RBP14□□□□□ -0.17
PTPRU-205ENST00000460170 POLE3Q9NRF9 147 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 RNF13O43567 381 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 CLEC3AO75596 197 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 AK4P27144 223 aaPredicted RBP14□□□□□ -0.17
PTPRU-205ENST00000460170 CERS1P27544 350 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 SHC2P98077 582 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 UGT8Q16880 541 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 KLHL26Q53HC5 615 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 NHSL2Q5HYW2 709 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 PGBD2Q6P3X8 592 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 RFLNAQ6ZTI6 216 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 TMEM151AQ8N4L1 468 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 OR8J2Q8NGG1 315 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 CDK1P06493 297 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 CAMK1Q14012 370 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 ZNF791Q3KP31 576 aaPredicted RBP14□□□□□ -0.17
PTPRU-205ENST00000460170 FRMPD2BQ6IN97 320 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 PLBD1Q6P4A8 553 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 SHFQ7M4L6 423 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 B3GNT8Q7Z7M8 397 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 TMEM173Q86WV6 379 aaPredicted RBP14□□□□□ -0.17
PTPRU-205ENST00000460170 FAM217AQ8IXS0 508 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 ALDH16A1Q8IZ83 802 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 PNLDC1Q8NA58 520 aaKnown RBP14□□□□□ -0.17
PTPRU-205ENST00000460170 SUN5Q8TC36 379 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 THAP4Q8WY91 577 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 ZDHHC12Q96GR4 267 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 PELOQ9BRX2 385 aaKnown RBP14□□□□□ -0.17
PTPRU-205ENST00000460170 BEX2Q9BXY8 128 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 BEX1Q9HBH7 125 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 ZNF639Q9UID6 485 aa14□□□□□ -0.17
PTPRU-205ENST00000460170 A0A1W2PPK0 400 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 EEF1E1O43324 174 aaKnown RBP13.99□□□□□ -0.17
PTPRU-205ENST00000460170 MC3RP41968 323 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 WNT4P56705 351 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 CDK3Q00526 305 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 ACVR1Q04771 509 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 LRRC20Q8TCA0 184 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 CREB3L1Q96BA8 519 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 RBP7Q96R05 134 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 FBRSQ9HAH7 460 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 BAIAP2Q9UQB8 552 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 M0R129 80 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 CASC3O15234 703 aaKnown RBP13.99□□□□□ -0.17
PTPRU-205ENST00000460170 PGFP49763 221 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 VEGFBP49765 207 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 ZNF542PQ5EBM4 170 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 MS4A15Q8N5U1 240 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 ACOT4Q8N9L9 421 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 OR4K17Q8NGC6 315 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 OR5D16Q8NGK9 328 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 ACOT12Q8WYK0 555 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 MS4A4EQ96PG1 132 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 ZNF559Q9BR84 538 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 PDE7BQ9NP56 450 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms