RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 KCNE3Q9Y6H6 103 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 A0A0C4DFX4 3053 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 SAC3D1A6NKF1 404 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 EFCAB7A8K855 629 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 TIAF1O95411 115 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 CBX7O95931 251 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 ACP2P11117 423 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 ZNF26P17031 533 aaPredicted RBP22.8■■□□□ 1.24
U2AF1-204ENST00000459639 PDX1P52945 283 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 SPEM2Q0P670 501 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 TAF11Q15544 211 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 WLSQ5T9L3 541 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 KRT73Q86Y46 540 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 EPHX4Q8IUS5 362 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 PACRGLQ8N7B6 248 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 SLC16A11Q8NCK7 471 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 RASSF5Q8WWW0 418 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 SLC35A4Q96G79 324 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 PTCHD1Q96NR3 888 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 TRNT1Q96Q11 434 aaKnown RBP22.8■■□□□ 1.24
U2AF1-204ENST00000459639 PRRX2Q99811 253 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 RUBCNLQ9H714 662 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 COQ10BQ9H8M1 238 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 NTN4Q9HB63 628 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 RXFP3Q9NSD7 469 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 SEMA4GQ9NTN9 838 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 PADI2Q9Y2J8 665 aa22.8■■□□□ 1.24
U2AF1-204ENST00000459639 GPC6Q9Y625 555 aaPredicted RBP22.8■■□□□ 1.24
U2AF1-204ENST00000459639 IGKV3D-11A0A0A0MRZ8 115 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 A0A0G2JPF8 293 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 HNRNPCL2B2RXH8 293 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 HNRNPCL3B7ZW38 293 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 CBFA2T3O75081 653 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 MFN2O95140 757 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 CHRM4P08173 479 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 HNRNPCL4P0DMR1 293 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 ETS2P15036 469 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 S1PR1P21453 382 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 EXOSC7Q15024 291 aaKnown RBP22.79■■□□□ 1.24
U2AF1-204ENST00000459639 GPAT3Q53EU6 434 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 CMPK2Q5EBM0 449 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 ZBTB49Q6ZSB9 765 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 COX15Q7KZN9 410 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 C16orf62Q7Z3J2 963 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 BMPERQ8N8U9 685 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 DOK4Q8TEW6 326 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 SLC9A6Q92581 669 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 STACQ99469 402 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 PIGUQ9H490 435 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 BAG5Q9UL15 447 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 OAZ3Q9UMX2 235 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 CACNA1HO95180 2353 aa22.79■■□□□ 1.24
U2AF1-204ENST00000459639 OR2W5A6NFC9 320 aa22.78■■□□□ 1.24
U2AF1-204ENST00000459639 H0YJX3 145 aa22.78■■□□□ 1.24
U2AF1-204ENST00000459639 AGRPO00253 132 aa22.78■■□□□ 1.24
U2AF1-204ENST00000459639 SERPINB7O75635 380 aa22.78■■□□□ 1.24
U2AF1-204ENST00000459639 ALOX5P09917 674 aa22.78■■□□□ 1.24
U2AF1-204ENST00000459639 ACADSP16219 412 aa22.78■■□□□ 1.24
U2AF1-204ENST00000459639 CCKBRP32239 447 aa22.78■■□□□ 1.24
U2AF1-204ENST00000459639 VLDLRP98155 873 aa22.78■■□□□ 1.24
U2AF1-204ENST00000459639 TCF15Q12870 199 aa22.78■■□□□ 1.24
U2AF1-204ENST00000459639 MINDY4Q4G0A6 757 aa22.78■■□□□ 1.24
U2AF1-204ENST00000459639 PPP4R4Q6NUP7 873 aa22.78■■□□□ 1.24
U2AF1-204ENST00000459639 RBM44Q6ZP01 1051 aaKnown RBP22.78■■□□□ 1.24
U2AF1-204ENST00000459639 OR52R1Q8NGF1 315 aa22.78■■□□□ 1.24
U2AF1-204ENST00000459639 GEMIN6Q8WXD5 167 aaKnown RBP22.78■■□□□ 1.24
U2AF1-204ENST00000459639 CLIP3Q96DZ5 547 aa22.78■■□□□ 1.24
U2AF1-204ENST00000459639 C7orf34Q96L11 122 aa22.78■■□□□ 1.24
U2AF1-204ENST00000459639 DUSP22Q9NRW4 184 aa22.78■■□□□ 1.24
U2AF1-204ENST00000459639 WDFY4Q6ZS81 3184 aa22.78■■□□□ 1.24
U2AF1-204ENST00000459639 SEC16AO15027 2179 aa22.78■■□□□ 1.24
U2AF1-204ENST00000459639 SYNDIG1LA6NDD5 238 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 LRP3O75074 770 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 NME6O75414 186 aaPredicted RBP22.77■■□□□ 1.24
U2AF1-204ENST00000459639 H6PDO95479 791 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 ONECUT2O95948 504 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 ATXN8OSP0DMR3 200 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 CD247P20963 164 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 RORAP35398 523 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 MAP3K8P41279 467 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 RHAGQ02094 409 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 ILKQ13418 452 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 CSRP2Q16527 193 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 DUSP5Q16690 384 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 MFSD4BQ5TF39 518 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 WDR53Q7Z5U6 358 aaPredicted RBP22.77■■□□□ 1.24
U2AF1-204ENST00000459639 SMYD1Q8NB12 490 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 SPPL2AQ8TCT8 520 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 HOXB13Q92826 284 aaPredicted RBP22.77■■□□□ 1.24
U2AF1-204ENST00000459639 CDS1Q92903 461 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 TMBIM1Q969X1 311 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 COL21A1Q96P44 957 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 SPATA5L1Q9BVQ7 753 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 TGIF2Q9GZN2 237 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 APMAPQ9HDC9 416 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 CCDC88CQ9P219 2028 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 ABCG2Q9UNQ0 655 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 DSPPQ9NZW4 1301 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 IGLV3-12A0A075B6K2 115 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 hCG_2039718K7EN88 272 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms