RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 OR5D16Q8NGK9 328 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 IMP4Q96G21 291 aaKnown RBP18.71■□□□□ 0.59
SNX27-204ENST00000458013 SLC41A3Q96GZ6 507 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 IGSF21Q96ID5 467 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 FAM83CQ9BQN1 747 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 AMY2AP04746 511 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 PET100P0DJ07 73 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 NRMQ8IXM6 262 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 BADQ92934 168 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 SLCO3A1Q9UIG8 710 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 CSF2RAP15509 400 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 CERS1P27544 350 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 SH3BP2P78314 561 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 HSD11B2P80365 405 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 CCDC28AQ8IWP9 274 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 TTC9BQ8N6N2 239 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 RCBTB1Q8NDN9 531 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 C16orf78Q8WTQ4 265 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 CCNL2Q96S94 520 aaPredicted RBP18.71■□□□□ 0.59
SNX27-204ENST00000458013 THEGLP0DJG4 465 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 SGSHP51688 502 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 CTBP2P56545 445 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 ZNF45Q02386 682 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 EIF2B1Q14232 305 aaKnown RBP18.71■□□□□ 0.59
SNX27-204ENST00000458013 MEDAGQ5VYS4 303 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 ELP2Q6IA86 826 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 SYT14Q8NB59 555 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 MGLLQ99685 303 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 SLC2A4RGQ9NR83 387 aa18.71■□□□□ 0.59
SNX27-204ENST00000458013 ZNF888P0CJ79 500 aaPredicted RBP18.71■□□□□ 0.58
SNX27-204ENST00000458013 RPL35P42766 123 aaKnown RBP18.71■□□□□ 0.58
SNX27-204ENST00000458013 FOXK1P85037 733 aa18.71■□□□□ 0.58
SNX27-204ENST00000458013 PLEKHG7Q6ZR37 379 aa18.71■□□□□ 0.58
SNX27-204ENST00000458013 LGALS12Q96DT0 336 aa18.71■□□□□ 0.58
SNX27-204ENST00000458013 NID2Q14112 1375 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 ZNF254O75437 659 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 GJB3O75712 270 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 PSMB10P40306 273 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 CEACAM7Q14002 265 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 SLC15A4Q8N697 577 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 ASCC1Q8N9N2 400 aaKnown RBP18.7■□□□□ 0.58
SNX27-204ENST00000458013 CHST14Q8NCH0 376 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 ARHGAP39Q9C0H5 1083 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 PRODH2Q9UF12 536 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 HOXC5Q00444 222 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 MRPL49Q13405 166 aaKnown RBP18.7■□□□□ 0.58
SNX27-204ENST00000458013 CYB561A3Q8NBI2 242 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 OR52N2Q8NGI0 321 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 OR9A2Q8NGT5 310 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 STK35Q8TDR2 534 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 HOXB13Q92826 284 aaPredicted RBP18.7■□□□□ 0.58
SNX27-204ENST00000458013 MOAP1Q96BY2 351 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 FAM71F1Q96KD3 344 aaPredicted RBP18.7■□□□□ 0.58
SNX27-204ENST00000458013 APOBEC3BQ9UH17 382 aaKnown RBP18.7■□□□□ 0.58
SNX27-204ENST00000458013 ACSL5Q9ULC5 683 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 ERCC1P07992 297 aaPredicted RBP18.7■□□□□ 0.58
SNX27-204ENST00000458013 PBX2P40425 430 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 SELENOVP59797 346 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 TMEM19Q96HH6 336 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 MMP27Q9H306 513 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 ANKRD26Q9UPS8 1709 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 KDM4FA0A1W2PPD8 638 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 UBFD1O14562 309 aaKnown RBP18.7■□□□□ 0.58
SNX27-204ENST00000458013 CASC3O15234 703 aaKnown RBP18.7■□□□□ 0.58
SNX27-204ENST00000458013 TMEM234Q8WY98 164 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 TMIGD2Q96BF3 282 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 TCEAL4Q96EI5 215 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 WDR92Q96MX6 357 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 STRADBQ9C0K7 418 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 KCNK13Q9HB14 408 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 CRTAPO75718 401 aaPredicted RBP18.7■□□□□ 0.58
SNX27-204ENST00000458013 NPPAP01160 153 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 JUPP14923 745 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 GRHL2Q6ISB3 625 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 UGT2A3Q6UWM9 527 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 HACD2Q6Y1H2 254 aa18.7■□□□□ 0.58
SNX27-204ENST00000458013 PAPOLGQ9BWT3 736 aaKnown RBP18.7■□□□□ 0.58
SNX27-204ENST00000458013 USP36Q9P275 1121 aaKnown RBP18.7■□□□□ 0.58
SNX27-204ENST00000458013 ENDOUP21128 410 aaKnown RBP18.69■□□□□ 0.58
SNX27-204ENST00000458013 DYRK1AQ13627 763 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 GPR137CQ8N3F9 429 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 OR14L1PQ8NHC6 308 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 FAM46BQ96A09 425 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 AIG1Q9NVV5 245 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 GPR32O75388 356 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 TMBIM6P55061 237 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 ZDHHC14Q8IZN3 488 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 NPWQ8N729 165 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 PLEKHA3Q9HB20 300 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 CCM2LQ9NUG4 571 aaPredicted RBP18.69■□□□□ 0.58
SNX27-204ENST00000458013 KLHL21Q9UJP4 597 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 IRF2P14316 349 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 BPIP17213 487 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 CNR2P34972 360 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 ELOAQ14241 798 aaKnown RBP18.69■□□□□ 0.58
SNX27-204ENST00000458013 RNF175Q8N4F7 328 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 TOMM40LQ969M1 308 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 KIAA1143Q96AT1 154 aaPredicted RBP18.69■□□□□ 0.58
SNX27-204ENST00000458013 VSX1Q9NZR4 365 aaPredicted RBP18.69■□□□□ 0.58
SNX27-204ENST00000458013 LTN1O94822 1766 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms