RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 SFRP4Q6FHJ7 346 aaPredicted RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 USP50Q70EL3 339 aaPredicted RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 LDLRAD3Q86YD5 345 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 KLBQ86Z14 1044 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 IZUMO1Q8IYV9 350 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 GPR135Q8IZ08 494 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 OR5M1Q8NGP8 315 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 OR4L1Q8NH43 312 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 PXYLP1Q8TE99 480 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 KLK6Q92876 244 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 HYLS1Q96M11 299 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 CHST6Q9GZX3 395 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 CSNK1G1Q9HCP0 422 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 ZSCAN32Q9NX65 697 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 HCSTQ9UBK5 93 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 TNFRSF10DQ9UBN6 386 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF106Q9H2Y7 1883 aaKnown RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 OR6C76A6NM76 312 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 ANHXE9PGG2 379 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 RFXANKO14593 260 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 TLX2O43763 284 aaPredicted RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 LY86O95711 162 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 THY1P04216 161 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 CTPS1P17812 591 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 AKT1P31749 480 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 GIPRP48546 466 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 PCBP3P57721 371 aaKnown RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 ZRANB3Q5FWF4 1079 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 GARNL3Q5VVW2 1013 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 LINGO4Q6UY18 593 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF367Q7RTV3 350 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 SPATA19Q7Z5L4 167 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 BHLHE23Q8NDY6 225 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 SPPL2AQ8TCT8 520 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 AUTS2Q8WXX7 1259 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 FCRL1Q96LA6 429 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 FAIM2Q9BWQ8 316 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 KATNBL1Q9H079 304 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 ATG10Q9H0Y0 220 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 P2RY12Q9H244 342 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 EML4Q9HC35 981 aaKnown RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 NDOR1Q9UHB4 597 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 MRTO4Q9UKD2 239 aaKnown RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 SPIN1Q9Y657 262 aaPredicted RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 KIAA1549Q9HCM3 1950 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 TEX51A0A1B0GUA7 166 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 F8W036 122 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 CHST10O43529 356 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 SOCS5O75159 536 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 EIF3GO75821 320 aaKnown RBP eCLIP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 ZIC2O95409 532 aaPredicted RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 TMIGD3P0DMS9 266 aaPredicted RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 APEHP13798 732 aaKnown RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 DNASE1P24855 282 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 GPX4P36969 197 aaPredicted RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 GNPDA1P46926 289 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 RAE1P78406 368 aaKnown RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 RING1Q06587 406 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 DOC2AQ14183 400 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 FAM187BQ17R55 369 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 PABPC1L2AQ5JQF8 200 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 NLRC3Q7RTR2 1065 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 MON1AQ86VX9 555 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 RASGRP3Q8IV61 690 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 CMIPQ8IY22 773 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 SYNPOQ8N3V7 929 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 OR52I1Q8NGK6 324 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 RNF34Q969K3 372 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 C3orf49Q96BT1 292 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 MARS2Q96GW9 593 aaKnown RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 SCLYQ96I15 445 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 IFT22Q9H7X7 185 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 PDFQ9HBH1 243 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 PRDM5Q9NQX1 630 aaPredicted RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 NPDC1Q9NQX5 325 aaPredicted RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 DYRK4Q9NR20 520 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 CYSLTR2Q9NS75 346 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 NRBP2Q9NSY0 501 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 SEC14L3Q9UDX4 400 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 AFF4Q9UHB7 1163 aaKnown RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 TCEAL9Q9UHQ7 104 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 POMT2Q9UKY4 750 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 SH2B3Q9UQQ2 575 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 NOD1Q9Y239 953 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 H3BNC9 293 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 H3BRB1 525 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 WNT9AO14904 365 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 INPPL1O15357 1258 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 EIF1BO60739 113 aaKnown RBP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC43A1O75387 559 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 MTX2O75431 263 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 TCRBP04435 133 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 SPP1P10451 314 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC2A3P11169 496 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 PKMP14618 531 aaKnown RBP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 MMP11P24347 488 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 EIF1P41567 113 aaKnown RBP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 DEFA1P59665 94 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 DEFA3P59666 94 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 PYDC2Q56P42 97 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms