RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 C3orf30Q96M34 536 aa15.97■□□□□ 0.15
USP39-208ENST00000455732 FAM173AQ9BQD7 235 aa15.97■□□□□ 0.15
USP39-208ENST00000455732 ITPAQ9BY32 194 aa15.97■□□□□ 0.15
USP39-208ENST00000455732 BCAP29Q9UHQ4 241 aa15.97■□□□□ 0.15
USP39-208ENST00000455732 NPIPA1Q9UND3 350 aa15.97■□□□□ 0.15
USP39-208ENST00000455732 ZNF835Q9Y2P0 537 aa15.97■□□□□ 0.15
USP39-208ENST00000455732 RAP2CQ9Y3L5 183 aa15.97■□□□□ 0.15
USP39-208ENST00000455732 CHCHD2Q9Y6H1 151 aaPredicted RBP15.97■□□□□ 0.15
USP39-208ENST00000455732 A0A087WV62 115 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 A0A0G2JMM0 328 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 A0A1W2PPB8 328 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 A0A1W2PRS3 328 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 PINLYPA6NC86 204 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 KIR3DP1A8MWS1 328 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 PLOD2O00469 737 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 TFECO14948 347 aaPredicted RBP15.96■□□□□ 0.15
USP39-208ENST00000455732 ACOX3O15254 700 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 SLC19A2O60779 497 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 ZG16O60844 167 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 GLSO94925 669 aaPredicted RBP15.96■□□□□ 0.15
USP39-208ENST00000455732 FREM3P0C091 2139 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 BCKDHAP12694 445 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 NAGAP17050 411 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 SLC1A6P48664 564 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 NCBP2P52298 156 aaKnown RBP eCLIP15.96■□□□□ 0.153e-6■■□□□ 12.2
USP39-208ENST00000455732 WDR4P57081 412 aaKnown RBP15.96■□□□□ 0.15
USP39-208ENST00000455732 PSPHP78330 225 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 RPS6KA2Q15349 733 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 HHATQ5VTY9 493 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 SLC22A10Q63ZE4 541 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 Q6ZPB1 254 aaPredicted RBP15.96■□□□□ 0.15
USP39-208ENST00000455732 RGS9BPQ6ZS82 235 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 CHERPQ8IWX8 916 aaKnown RBP15.96■□□□□ 0.15
USP39-208ENST00000455732 ANKRD42Q8N9B4 389 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 SIMC1Q8NDZ2 872 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 OR10G3Q8NGC4 313 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 MTERF3Q96E29 417 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 HSPBAP1Q96EW2 488 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 LCORQ96JN0 433 aaPredicted RBP15.96■□□□□ 0.15
USP39-208ENST00000455732 TSSK3Q96PN8 268 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 BTBD9Q96Q07 612 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 SECISBP2Q96T21 854 aaKnown RBP15.96■□□□□ 0.15
USP39-208ENST00000455732 SORT1Q99523 831 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 C20orf27Q9GZN8 174 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 NXF5Q9H1B4 397 aaKnown RBP15.96■□□□□ 0.15
USP39-208ENST00000455732 REEP4Q9H6H4 257 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 ZNF395Q9H8N7 513 aaPredicted RBP15.96■□□□□ 0.15
USP39-208ENST00000455732 CNIH4Q9P003 139 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 NPFFR2Q9Y5X5 522 aa15.96■□□□□ 0.15
USP39-208ENST00000455732 MYO9AB2RTY4 2548 aa15.96■□□□□ 0.14
USP39-208ENST00000455732 TRGV8A0A0C4DH27 118 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 ANKRD33BA6NCL7 494 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 FRG2CA6NGY1 282 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 TO15178 435 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 SKAP2O75563 359 aaPredicted RBP15.95■□□□□ 0.14
USP39-208ENST00000455732 DRD5P21918 477 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 ABCD3P28288 659 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 PPICP45877 212 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 FOXO1Q12778 655 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 STX3Q13277 289 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 HYAL4Q2M3T9 481 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 SMU1Q2TAY7 513 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 C6orf136Q5SQH8 315 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 AGBL2Q5U5Z8 902 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 FAM47EQ6ZV65 393 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 GHDCQ8N2G8 530 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 OR7G2Q8NG99 324 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 KAT2AQ92830 837 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 VSTM2LQ96N03 204 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 AMDHD1Q96NU7 426 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 TTTY12Q9BZ98 90 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 GLIPR2Q9H4G4 154 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 IL1RL2Q9HB29 575 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 PLSCR2Q9NRY7 297 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 CNOT11Q9UKZ1 510 aaKnown RBP15.95■□□□□ 0.14
USP39-208ENST00000455732 NCKAP5O14513 1909 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 CACNA1CQ13936 2221 aa15.95■□□□□ 0.14
USP39-208ENST00000455732 ATP6AP2A0A1C7CYW4 349 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 ACOT7O00154 380 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 TP53I11O14683 189 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 PEX11AO75192 247 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 COQ9O75208 318 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 ATP6AP2O75787 350 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 PSMG1O95456 288 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 JUNP05412 331 aaKnown RBP15.94■□□□□ 0.14
USP39-208ENST00000455732 DDX5P17844 614 aaKnown RBP15.94■□□□□ 0.14
USP39-208ENST00000455732 RFC3P40938 356 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 FRKP42685 505 aaPredicted RBP15.94■□□□□ 0.14
USP39-208ENST00000455732 RPL14P50914 215 aaKnown RBP15.94■□□□□ 0.14
USP39-208ENST00000455732 BST1Q10588 318 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 C3AR1Q16581 482 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 CMPK2Q5EBM0 449 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 TBCELQ5QJ74 424 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 TMEM64Q6YI46 380 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 SLC22A16Q86VW1 577 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 SPPL2CQ8IUH8 684 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 OR2L13Q8N349 312 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 FAM13CQ8NE31 585 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 RAB3IL1Q8TBN0 382 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 GFM2Q969S9 779 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms