RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 OPN1MW3P0DN78 364 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 TROVE2P10155 538 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 TDGF1P13385 188 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 SLC2A4P14672 509 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 ZNF28P17035 718 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 HOXB9P17482 250 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 HIST1H2ADP20671 130 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 CYP2A7P20853 494 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 CD27P26842 260 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 ACAA2P42765 397 aaKnown RBP4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 GNPDA1P46926 289 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 HNMTP50135 292 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 RPL14P50914 215 aaKnown RBP4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 THOP1P52888 689 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 CDH13P55290 713 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 AP1S2P56377 157 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 SRP54P61011 504 aaKnown RBP4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 NAA20P61599 178 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 CDKL1Q00532 357 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 DMPKQ09013 629 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 DMWDQ09019 674 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 PRKAA1Q13131 559 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 DNASE1L3Q13609 305 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 DYRK1AQ13627 763 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 RIN1Q13671 783 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 HLXQ14774 488 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 ZXDCQ2QGD7 858 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 COL28A1Q2UY09 1125 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 C18orf21Q32NC0 220 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 CD300EQ496F6 205 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 FBXO48Q5FWF7 155 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 PMS2CLQ68D20 193 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 SULT1C3Q6IMI6 304 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 CAPRIN2Q6IMN6 1127 aaKnown RBP4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 METTL2BQ6P1Q9 378 aaKnown RBP4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 TTC23LQ6PF05 361 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 SLC36A4Q6YBV0 504 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 MBOAT1Q6ZNC8 495 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 FRA10AC1Q70Z53 315 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 RPS27LQ71UM5 84 aaKnown RBP4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 PRSS45Q7RTY3 260 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 TMEM200AQ86VY9 491 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 DEFB119Q8N690 84 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 ZNF781Q8N8C0 355 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 FBXO15Q8NCQ5 510 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 CCDC197Q8NCU1 140 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 RBM15BQ8NDT2 890 aaKnown RBP4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 CFAP61Q8NHU2 1237 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 UBTD2Q8WUN7 234 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 TFGQ92734 400 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 TSACCQ96A04 125 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 ESAMQ96AP7 390 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 FBXL8Q96CD0 374 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 THOC1Q96FV9 657 aaKnown RBP4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 WDYHV1Q96HA8 205 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 TMEM68Q96MH6 324 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 FOPNLQ96NB1 174 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 TXN2Q99757 166 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 TIMM29Q9BSF4 260 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 CADM1Q9BY67 442 aaKnown RBP4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 SHCBP1LQ9BZQ2 653 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 WWP1Q9H0M0 922 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 TMEM168Q9H0V1 697 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 EML4Q9HC35 981 aaKnown RBP4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 KLC4Q9NSK0 619 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 OLAHQ9NV23 265 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 ARL15Q9NXU5 204 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 EXTL2Q9UBQ6 330 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 UPB1Q9UBR1 384 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 ZDHHC2Q9UIJ5 367 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 PCTPQ9UKL6 214 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 ARL2BPQ9Y2Y0 163 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 SLCO1B1Q9Y6L6 691 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 ASXL3Q9C0F0 2248 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 VPS13AQ96RL7 3174 aa4.9□□□□□ -1.63
HMGB1P4-201ENST00000455362 PRAMEF33A0A0G2JMD5 474 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 SPTY2D1-AS1A0A0U1RR47 76 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 A0A1B0GTL3 188 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 A0A1W2PR77 199 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 OR6C68A6NDL8 312 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 SLCO1B7G3V0H7 640 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 MATN2O00339 956 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 E2F3O00716 465 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 DSCR3O14972 297 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 PPM1DO15297 605 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 HDAC3O15379 428 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 PRAMEF10O60809 474 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 STK16O75716 305 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 GPANK1O95872 356 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 TNFP01375 233 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 WNT1P04628 370 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 HOXB5P09067 269 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 FAM58BPP0C7Q3 252 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 IGFBP2P18065 325 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 TSPAN8P19075 237 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 BCKDHBP21953 392 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 IDSP22304 550 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 GDF5P43026 501 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 SLC6A12P48065 614 aa4.89□□□□□ -1.63
HMGB1P4-201ENST00000455362 CLCNKAP51800 687 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms