RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 FBXW2Q9UKT8 454 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 SNX7Q9UNH6 387 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 SSR3Q9UNL2 185 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 KLHL20Q9Y2M5 609 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 GRIP1Q9Y3R0 1128 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 PCDHGB2Q9Y5G2 931 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 M0R3H8 397 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 MYL12BO14950 172 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 PROM1O43490 865 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 PRKYO43930 277 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 PCDH8O95206 1070 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 AIFM1O95831 613 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 HMGN2P05204 90 aaKnown RBP11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 ACP5P13686 325 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 CMPK1P30085 196 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 PRKAR1BP31321 381 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 RPS19P39019 145 aaKnown RBP11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 FEN1P39748 380 aaKnown RBP11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 TMED10P49755 219 aaKnown RBP11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 STXBP1P61764 594 aaKnown RBP11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 RPS21P63220 83 aaKnown RBP11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 PSPHP78330 225 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 TGM3Q08188 693 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 ACSM1Q08AH1 577 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 SLAMF1Q13291 335 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 TRAM2Q15035 370 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 MINDY4Q4G0A6 757 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 HEPHL1Q6MZM0 1159 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 ACSM5Q6NUN0 579 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 CD200R1LQ6Q8B3 271 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 SLC36A4Q6YBV0 504 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 PRR23CQ6ZRP0 262 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 GDPD3Q7L5L3 318 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 WDR53Q7Z5U6 358 aaPredicted RBP11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 SAMD14Q8IZD0 417 aaPredicted RBP11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 OR52E1Q8NGJ3 308 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 OR5D16Q8NGK9 328 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 NT5CQ8TCD5 201 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 KIAA1143Q96AT1 154 aaPredicted RBP11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 KLHL31Q9H511 634 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 FBRSQ9HAH7 460 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 PRDM8Q9NQV8 689 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 POLE4Q9NR33 117 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 DZANK1Q9NVP4 752 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 FBXL12Q9NXK8 326 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 TRPC4Q9UBN4 977 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 CLEC2DQ9UHP7 191 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 ENTPD4Q9Y227 616 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 EXOSC1Q9Y3B2 195 aaKnown RBP11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 SF3B6Q9Y3B4 125 aaKnown RBP11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 ATG4BQ9Y4P1 393 aa11.77□□□□□ -0.52
ECHDC1-209ENST00000454591 COL4A2P08572 1712 aa11.77□□□□□ -0.53
ECHDC1-209ENST00000454591 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 A0A087WUU8 490 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 GSAPA4D1B5 854 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 PPM1DO15297 605 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 ERI3O43414 337 aaKnown RBP11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 KLF4O43474 513 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 UBXN7O94888 489 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 AGR2O95994 175 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 APOA1P02647 267 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 APODP05090 189 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 NDUFS1P28331 727 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 GTF2E2P29084 291 aaKnown RBP11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 PEBP1P30086 187 aaKnown RBP11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 FGF9P31371 208 aaPredicted RBP11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 MPIP34949 423 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 STAT5AP42229 794 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 WNT4P56705 351 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 CD300CQ08708 224 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 LARS2Q15031 903 aaKnown RBP11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 RPE65Q16518 533 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 BCL2A1Q16548 175 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 DECR1Q16698 335 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 PLK5Q496M5 336 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 ZNF776Q68DI1 518 aaPredicted RBP11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 TMC5Q6UXY8 1006 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 HSDL2Q6YN16 418 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 ADGRD2Q7Z7M1 963 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 IQCHQ86VS3 1027 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 KIF18BQ86Y91 864 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 C12orf76Q8N812 135 aaPredicted RBP11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 ZNF485Q8NCK3 441 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 ASB15Q8WXK1 588 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 HPS1Q92902 700 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 GAL3ST3Q96A11 431 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 SLC25A46Q96AG3 418 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 ELP4Q96EB1 424 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 GIMAP5Q96F15 307 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 C10orf90Q96M02 699 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 OR7D2Q96RA2 312 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 GPA33Q99795 319 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 COQ7Q99807 217 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 C1QTNF7Q9BXJ2 289 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 ROGDIQ9GZN7 287 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 TRIM45Q9H8W5 580 aaPredicted RBP11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 KCNK12Q9HB15 430 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 GIMAP4Q9NUV9 329 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 TVP23BQ9NYZ1 205 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 KLF15Q9UIH9 416 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms