RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 ITPAQ9BY32 194 aa13.51□□□□□ -0.25
TRAPPC12-211ENST00000452495 CDCP1Q9H5V8 836 aa13.51□□□□□ -0.25
TRAPPC12-211ENST00000452495 ZCCHC3Q9NUD5 404 aaKnown RBP13.51□□□□□ -0.25
TRAPPC12-211ENST00000452495 CCDC154A6NI56 674 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 TMEM200CA6NKL6 621 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 TTC36A6NLP5 189 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 SLC22A2O15244 555 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 ATXN7O15265 892 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 DPM1O60762 260 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 CCDC22O60826 627 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 FAM107AO95990 144 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 ABCB1P08183 1280 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 TRHRP34981 398 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 SOAT1P35610 550 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 SSR4P51571 173 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 SF3A3Q12874 501 aaKnown RBP eCLIP13.5□□□□□ -0.253e-9■□□□□ 10.4
TRAPPC12-211ENST00000452495 MAPKAPK3Q16644 382 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 SPDYE7PQ495Y7 208 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 PCSK4Q6UW60 755 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 SZRD1Q7Z422 152 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 ANKRD46Q86W74 232 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 DND1Q8IYX4 353 aaKnown RBP13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 TRIML2Q8N7C3 387 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 NUP43Q8NFH3 380 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 GOT1L1Q8NHS2 421 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 THAP3Q8WTV1 239 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 TSPEARQ8WU66 669 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 ADIPOR1Q96A54 375 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 SPDL1Q96EA4 605 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 FAM120BQ96EK7 910 aaKnown RBP13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 VSTM2LQ96N03 204 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 BTBD9Q96Q07 612 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 PANX1Q96RD7 426 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 CXorf36Q9H7Y0 433 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 ANKRA2Q9H9E1 313 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 FOLH1BQ9HBA9 442 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 SAR1AQ9NR31 198 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 STMN3Q9NZ72 180 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 DTX4Q9Y2E6 619 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 SNX8Q9Y5X2 465 aa13.5□□□□□ -0.25
TRAPPC12-211ENST00000452495 EML6Q6ZMW3 1958 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 RNF103-CHMP3A0A140T963 221 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 OR5H15A6NDH6 313 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 FRG2CA6NGY1 282 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 WWP2O00308 870 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 ACOX3O15254 700 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 ERN1O75460 977 aaKnown RBP13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 OR2J2O76002 312 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 KRT16P08779 473 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 DRD5P21918 477 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 PPICP45877 212 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 CCT3P49368 545 aaKnown RBP13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 PRIM2P49643 509 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 NRG3P56975 720 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 ARG2P78540 354 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 MAPRE2Q15555 327 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 ZNHIT3Q15649 155 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 ZCCHC12Q6PEW1 402 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 OPN5Q6U736 354 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 ASB18Q6ZVZ8 466 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 PIGWQ7Z7B1 504 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 FUNDC1Q8IVP5 155 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 TAGAPQ8N103 731 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 ZADH2Q8N4Q0 377 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 EXD3Q8N9H8 876 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 CDRT4Q8N9R6 151 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 SIMC1Q8NDZ2 872 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 ASB15Q8WXK1 588 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 HAS2Q92819 552 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 HOXB13Q92826 284 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 HSPBAP1Q96EW2 488 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 ITCHQ96J02 903 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 MAGED4Q96JG8 741 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 LCORQ96JN0 433 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 RASL10BQ96S79 203 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 UTP23Q9BRU9 249 aaKnown RBP13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 LMF2Q9BU23 707 aaKnown RBP13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 NMUR2Q9GZQ4 415 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 SLC25A18Q9H1K4 315 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 TRIM45Q9H8W5 580 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 VPS4AQ9UN37 437 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 PIEZO2Q9H5I5 2752 aa13.49□□□□□ -0.25
TRAPPC12-211ENST00000452495 CNTRLQ7Z7A1 2325 aa13.48□□□□□ -0.25
TRAPPC12-211ENST00000452495 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.48□□□□□ -0.25
TRAPPC12-211ENST00000452495 RFXANKO14593 260 aa13.48□□□□□ -0.25
TRAPPC12-211ENST00000452495 TO15178 435 aa13.48□□□□□ -0.25
TRAPPC12-211ENST00000452495 MAN1A2O60476 641 aa13.48□□□□□ -0.25
TRAPPC12-211ENST00000452495 NADKO95544 446 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC12-211ENST00000452495 WDPCPO95876 746 aa13.48□□□□□ -0.25
TRAPPC12-211ENST00000452495 PDGFAP04085 211 aa13.48□□□□□ -0.25
TRAPPC12-211ENST00000452495 ZCCHC18P0CG32 403 aa13.48□□□□□ -0.25
TRAPPC12-211ENST00000452495 CAPN3P20807 821 aa13.48□□□□□ -0.25
TRAPPC12-211ENST00000452495 UQCRC2P22695 453 aa13.48□□□□□ -0.25
TRAPPC12-211ENST00000452495 TMED10P49755 219 aaKnown RBP13.48□□□□□ -0.25
TRAPPC12-211ENST00000452495 HLCSP50747 726 aa13.48□□□□□ -0.25
TRAPPC12-211ENST00000452495 NR0B1P51843 470 aaKnown RBP13.48□□□□□ -0.25
TRAPPC12-211ENST00000452495 GAB1Q13480 694 aa13.48□□□□□ -0.25
TRAPPC12-211ENST00000452495 TUBA3CQ13748 450 aa13.48□□□□□ -0.25
TRAPPC12-211ENST00000452495 VPS26BQ4G0F5 336 aa13.48□□□□□ -0.25
TRAPPC12-211ENST00000452495 PIGGQ5H8A4 983 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms