RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 FOXO6A8MYZ6 492 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 ACOX3O15254 700 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 GLRA3O75311 464 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 PPM1BO75688 479 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 BCAS2O75934 225 aaPredicted RBP11.81□□□□□ -0.52
CHD3-206ENST00000452447 TOXO94900 526 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 ABCB1P08183 1280 aaPredicted RBP11.81□□□□□ -0.52
CHD3-206ENST00000452447 IL3P08700 152 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 MYL2P10916 166 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 CCT5P48643 541 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 DCAF7P61962 342 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 MRPS35P82673 323 aaKnown RBP11.81□□□□□ -0.52
CHD3-206ENST00000452447 HMGCS1Q01581 520 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 TLE4Q04727 773 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 BTKQ06187 659 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 MGAT2Q10469 447 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 DUSP8Q13202 625 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 TRMT12Q53H54 448 aaKnown RBP11.81□□□□□ -0.52
CHD3-206ENST00000452447 SPDYAQ5MJ70 313 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 CCDC116Q8IYX3 515 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 SAMD14Q8IZD0 417 aaPredicted RBP11.81□□□□□ -0.52
CHD3-206ENST00000452447 OR52R1Q8NGF1 315 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 UBLCP1Q8WVY7 318 aaPredicted RBP11.81□□□□□ -0.52
CHD3-206ENST00000452447 CTHRC1Q96CG8 243 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 ZNF681Q96N22 645 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 EPB41L4BQ9H329 900 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 METTL7AQ9H8H3 244 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 HEY2Q9UBP5 337 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 ZNF639Q9UID6 485 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 PLLPQ9Y342 182 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 PCDHGB3Q9Y5G1 929 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 F8P00451 2351 aa11.81□□□□□ -0.52
CHD3-206ENST00000452447 A0A0G2JNJ9 132 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 A0A1W2PPM1 405 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 CRCPO75575 148 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 PCSK2P16519 638 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 MSX1P28360 303 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 TIA1P31483 386 aaKnown RBP eCLIP11.8□□□□□ -0.52
CHD3-206ENST00000452447 HTR6P50406 440 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 NAA20P61599 178 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 TFF3Q07654 80 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 PLCXD2Q0VAA5 305 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 LTB4RQ15722 352 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 IMPG1Q17R60 797 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 CFAP157Q5JU67 520 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 NUP54Q7Z3B4 507 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 ACBD4Q8NC06 268 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 MZB1Q8WU39 189 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 EXOSC8Q96B26 276 aaKnown RBP11.8□□□□□ -0.52
CHD3-206ENST00000452447 OMA1Q96E52 524 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 APIPQ96GX9 242 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 GNRHR2Q96P88 292 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 KCNA7Q96RP8 456 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 GSTO2Q9H4Y5 243 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 NPDC1Q9NQX5 325 aaPredicted RBP11.8□□□□□ -0.52
CHD3-206ENST00000452447 Q9UFV3 132 aa11.8□□□□□ -0.52
CHD3-206ENST00000452447 CBX7O95931 251 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 ANXA4P09525 319 aaPredicted RBP11.79□□□□□ -0.52
CHD3-206ENST00000452447 CAPN3P20807 821 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 DRD5P21918 477 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 PPICP45877 212 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 GSTM5P46439 218 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 SLCO1A2P46721 670 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 RAE1P78406 368 aaKnown RBP11.79□□□□□ -0.52
CHD3-206ENST00000452447 DUSP2Q05923 314 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 CCDC153Q494R4 210 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 TIGD3Q6B0B8 471 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 GALNT18Q6P9A2 607 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 SCIMPQ6UWF3 145 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 ZYG11AQ6WRX3 759 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 ULK2Q8IYT8 1036 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 CLYBLQ8N0X4 340 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 EIF1ADQ8N9N8 165 aaKnown RBP11.79□□□□□ -0.52
CHD3-206ENST00000452447 CCDC63Q8NA47 563 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 SIMC1Q8NDZ2 872 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 OR1J4Q8NGS1 313 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 ZNF675Q8TD23 568 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 C16orf78Q8WTQ4 265 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 TMEM41AQ96HV5 264 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 TREX2Q9BQ50 279 aaPredicted RBP11.79□□□□□ -0.52
CHD3-206ENST00000452447 EBPLQ9BY08 206 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 UBQLN3Q9H347 655 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 PPCSQ9HAB8 311 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 SLC24A3Q9HC58 644 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 MCCC2Q9HCC0 563 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 KLRF1Q9NZS2 232 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 SENP1Q9P0U3 644 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 EMCNQ9ULC0 261 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 GRID1Q9ULK0 1009 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 C15orf41Q9Y2V0 281 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 CELSR1Q9NYQ6 3014 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 DOCK7Q96N67 2140 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 SMIM23A6NLE4 172 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 AHRRA9YTQ3 701 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 G3V2L1 256 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 H3BQF6 201 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 GNB5O14775 395 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 HPNP05981 417 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 IGFBP2P18065 325 aa11.79□□□□□ -0.52
CHD3-206ENST00000452447 MPIP34949 423 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms