RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 MGRN1O60291 552 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 NME2P1O60361 137 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 ITGA10O75578 1167 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 SLC22A3O75751 556 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 IL3P08700 152 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 NR2F6P10588 404 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 ESRRAP11474 423 aaPredicted RBP15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 NME2P22392 152 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 TACR1P25103 407 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 TRHRP34981 398 aaPredicted RBP15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 ALDH9A1P49189 494 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 PTGR1Q14914 329 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 ELAVL1Q15717 326 aaKnown RBP15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 DPY19L1Q2PZI1 675 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 NDUFAF5Q5TEU4 345 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 ZNF787Q6DD87 383 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 FAM71E1Q6IPT2 247 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 TMEM156Q8N614 296 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 FAM98AQ8NCA5 519 aaKnown RBP15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 PTPMT1Q8WUK0 201 aaPredicted RBP15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 ANKRD9Q96BM1 317 aaPredicted RBP15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 FRMD6Q96NE9 622 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 OR8D2Q9GZM6 311 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 REEP4Q9H6H4 257 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 PPIEQ9UNP9 301 aaKnown RBP15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 ATG4BQ9Y4P1 393 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 PCDHA9Q9Y5H5 950 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 A0A1W2PR48 441 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 ASPDHA6ND91 283 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 TMEM200CA6NKL6 621 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 C17orf105B2RV13 164 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 AKAP10O43572 662 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 FGF17O60258 216 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 PRKRAO75569 313 aaKnown RBP15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 ZFAND5O76080 213 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 LRATO95237 230 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 DDCP20711 480 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 RFC3P40938 356 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 NME5P56597 212 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 C21orf58P58505 322 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 KCNJ2P63252 427 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 MAPRE2Q15555 327 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 RNFT1Q5M7Z0 435 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 C18orf63Q68DL7 685 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 OR52E8Q6IFG1 317 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 ARMC10Q8N2F6 343 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 NATD1Q8N6N6 113 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 CLHC1Q8NHS4 586 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 DOK4Q8TEW6 326 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 TANKQ92844 425 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 RELTQ969Z4 430 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 TMEM125Q96AQ2 219 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 EGLN2Q96KS0 407 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 RPF2Q9H7B2 306 aaKnown RBP15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 TRIM45Q9H8W5 580 aaPredicted RBP15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 GIMAP4Q9NUV9 329 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 ATAD3AQ9NVI7 634 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 TEX10Q9NXF1 929 aaPredicted RBP15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 EHD3Q9NZN3 535 aa15.79■□□□□ 0.12
PRPF40A-204ENST00000450303 EML6Q6ZMW3 1958 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 SYNDIG1LA6NDD5 238 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 WASHC1A8K0Z3 465 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 WWP2O00308 870 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 CCL21O00585 134 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 TBX19O60806 448 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 AIFM1O95831 613 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 COX7A2P14406 83 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 GPX3P22352 226 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 SSR4P51571 173 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 UFM1P61960 85 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 RBPJQ06330 500 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 GTF3C1Q12789 2109 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 BIKQ13323 160 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 SERTAD2Q14140 314 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 AGKQ53H12 422 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 MDGA2Q7Z553 956 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 SAMD14Q8IZD0 417 aaPredicted RBP15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 CYP4Z2PQ8N1L4 340 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 MORN4Q8NDC4 146 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 DAZLQ92904 295 aaKnown RBP15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 GFM2Q969S9 779 aaKnown RBP15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 PPWD1Q96BP3 646 aaKnown RBP15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 PPCDCQ96CD2 204 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 GPR137Q96N19 417 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 NMUR2Q9GZQ4 415 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 ZNF385DQ9H6B1 395 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 SH3BP4Q9P0V3 963 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 ATP6V1HQ9UI12 483 aa15.78■□□□□ 0.12
PRPF40A-204ENST00000450303 CACNA1DQ01668 2161 aa15.77■□□□□ 0.12
PRPF40A-204ENST00000450303 NBPF19A0A087WUL8 3843 aa15.77■□□□□ 0.12
PRPF40A-204ENST00000450303 FAM234BA2RU67 622 aa15.77■□□□□ 0.12
PRPF40A-204ENST00000450303 CDK2AP1O14519 115 aa15.77■□□□□ 0.12
PRPF40A-204ENST00000450303 SCAMP2O15127 329 aaKnown RBP15.77■□□□□ 0.12
PRPF40A-204ENST00000450303 OR2J2O76002 312 aa15.77■□□□□ 0.12
PRPF40A-204ENST00000450303 ATP6V1G2O95670 118 aa15.77■□□□□ 0.12
PRPF40A-204ENST00000450303 S100A3P33764 101 aa15.77■□□□□ 0.12
PRPF40A-204ENST00000450303 MEOX1P50221 254 aa15.77■□□□□ 0.12
PRPF40A-204ENST00000450303 MNAT1P51948 309 aa15.77■□□□□ 0.12
PRPF40A-204ENST00000450303 POLR2JP52435 117 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms