RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 ABCG2Q9UNQ0 655 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 MAU2Q9Y6X3 613 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 LAMB1P07942 1786 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 USP54Q70EL1 1684 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 FXYD6-FXYD2A0A087WZ82 144 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 M0R129 80 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 OR7A17O14581 309 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 EEF1E1O43324 174 aaKnown RBP9.88□□□□□ -0.83
CTC1-202ENST00000449476 SOX30O94993 753 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 PGAM2P15259 253 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 ARNTP27540 789 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 ARHGDIBP52566 201 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 CHAF1BQ13112 559 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 GAS6Q14393 721 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 TRAM1Q15629 374 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 PHF19Q5T6S3 580 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 CST9Q5W186 159 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 PLBD1Q6P4A8 553 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 OR2T11Q8NH01 316 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 NDNFQ8TB73 568 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 SGTBQ96EQ0 304 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 GPR174Q9BXC1 333 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 FXYD6Q9H0Q3 95 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 ABCG5Q9H222 651 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 TRPV4Q9HBA0 871 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 MYNNQ9NPC7 610 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 FAIMQ9NVQ4 179 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 SIPA1L3O60292 1781 aaPredicted RBP9.88□□□□□ -0.83
CTC1-202ENST00000449476 MRPS14O60783 128 aaKnown RBP9.88□□□□□ -0.83
CTC1-202ENST00000449476 HMGN2P05204 90 aaKnown RBP9.88□□□□□ -0.83
CTC1-202ENST00000449476 ZNF26P17031 533 aaPredicted RBP9.88□□□□□ -0.83
CTC1-202ENST00000449476 VAMP1P23763 118 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 GJA8P48165 433 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 SGSHP51688 502 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 EMX1Q04741 257 aaPredicted RBP9.88□□□□□ -0.83
CTC1-202ENST00000449476 SBSNQ6UWP8 590 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 OR6N1Q8NGY5 312 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 THRSPQ92748 146 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 DNAJA3Q96EY1 480 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 METTL7AQ9H8H3 244 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 PDE7BQ9NP56 450 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 FRS3O43559 492 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 ALPLP05186 524 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 JUNDP17535 347 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 CEBPBP17676 345 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 RFLNAQ6ZTI6 216 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 TMEM17Q86X19 198 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 FAM86B1Q8N7N1 296 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 RASGEF1AQ8N9B8 481 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 OR5T3Q8NGG3 340 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 HIST1H2AAQ96QV6 131 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 MARCH5Q9NX47 278 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 ALKBH4Q9NXW9 302 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 APOBEC3BQ9UH17 382 aaKnown RBP9.87□□□□□ -0.83
CTC1-202ENST00000449476 NRAPQ86VF7 1730 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 NUP205Q92621 2012 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 TRBV2A0A0J9YWF9 115 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 TRAPPC13A5PLN9 417 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 GATBO75879 557 aaKnown RBP9.87□□□□□ -0.83
CTC1-202ENST00000449476 C1orf105O95561 183 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 C1SP09871 688 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 GSTT2P0CG29 244 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 CERS1P27544 350 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 SLC5A2P31639 672 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 POLR2IP36954 125 aaKnown RBP9.87□□□□□ -0.83
CTC1-202ENST00000449476 MC3RP41968 323 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 PRLHRP49683 370 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 SGCBQ16585 318 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 SLC5A12Q1EHB4 618 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 ALG10BQ5I7T1 473 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 ANKK1Q8NFD2 765 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 OR5D16Q8NGK9 328 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 THAP4Q8WY91 577 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 ZDHHC12Q96GR4 267 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 CWH43Q9H720 699 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 CNIH4Q9P003 139 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 HYKKA2RU49 373 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 L7N2F9 121 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 ATE1O95260 518 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 SPARCP09486 303 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 HBA1P69905 142 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 FAM26DQ5JW98 314 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 OTUD1Q5VV17 481 aaPredicted RBP9.87□□□□□ -0.83
CTC1-202ENST00000449476 PLAG1Q6DJT9 500 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 KCTD18Q6PI47 426 aaPredicted RBP9.87□□□□□ -0.83
CTC1-202ENST00000449476 PELI3Q8N2H9 469 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 SLC41A3Q96GZ6 507 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 CPPED1Q9BRF8 314 aaPredicted RBP9.87□□□□□ -0.83
CTC1-202ENST00000449476 TMEM30AQ9NV96 361 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 KLK3P07288 261 aaPredicted RBP9.87□□□□□ -0.83
CTC1-202ENST00000449476 PIM1P11309 404 aaPredicted RBP9.87□□□□□ -0.83
CTC1-202ENST00000449476 RBM34P42696 430 aaKnown RBP9.87□□□□□ -0.83
CTC1-202ENST00000449476 CDKN2CP42773 168 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 CXCR4P61073 352 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 RPL6Q02878 288 aaKnown RBP9.87□□□□□ -0.83
CTC1-202ENST00000449476 ARHGAP19Q14CB8 494 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 FRMPD2BQ6IN97 320 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 ARHGAP11AQ6P4F7 1023 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 TMEM207Q6UWW9 146 aa9.87□□□□□ -0.83
CTC1-202ENST00000449476 MRPL43Q8N983 215 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms