RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 COPS7AQ9UBW8 275 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 IL17BQ9UHF5 180 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 ZNF639Q9UID6 485 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 KCND3Q9UK17 655 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 IGHEP01854 428 aa13.62□□□□□ -0.23
TNF-208ENST00000449264 IFI6P09912 130 aa13.62□□□□□ -0.23
TNF-208ENST00000449264 NQO1P15559 274 aaKnown RBP13.62□□□□□ -0.23
TNF-208ENST00000449264 GPX2P18283 190 aa13.62□□□□□ -0.23
TNF-208ENST00000449264 MMP11P24347 488 aa13.62□□□□□ -0.23
TNF-208ENST00000449264 PRIM2P49643 509 aa13.62□□□□□ -0.23
TNF-208ENST00000449264 EEFSECP57772 596 aaKnown RBP13.62□□□□□ -0.23
TNF-208ENST00000449264 FADDQ13158 208 aa13.62□□□□□ -0.23
TNF-208ENST00000449264 IL10RAQ13651 578 aa13.62□□□□□ -0.23
TNF-208ENST00000449264 TBC1D25Q3MII6 688 aa13.62□□□□□ -0.23
TNF-208ENST00000449264 RNF111Q6ZNA4 994 aa13.62□□□□□ -0.23
TNF-208ENST00000449264 VASH2Q86V25 355 aa13.62□□□□□ -0.23
TNF-208ENST00000449264 OR2T12Q8NG77 320 aa13.62□□□□□ -0.23
TNF-208ENST00000449264 SLC9A6Q92581 669 aa13.62□□□□□ -0.23
TNF-208ENST00000449264 NCLNQ969V3 563 aa13.62□□□□□ -0.23
TNF-208ENST00000449264 ART5Q96L15 291 aa13.62□□□□□ -0.23
TNF-208ENST00000449264 RAB3IPQ96QF0 476 aaPredicted RBP13.62□□□□□ -0.23
TNF-208ENST00000449264 WDR77Q9BQA1 342 aaPredicted RBP13.62□□□□□ -0.23
TNF-208ENST00000449264 NTMQ9P121 344 aa13.62□□□□□ -0.23
TNF-208ENST00000449264 AP3M1Q9Y2T2 418 aa13.62□□□□□ -0.23
TNF-208ENST00000449264 BCAS2O75934 225 aaPredicted RBP13.61□□□□□ -0.23
TNF-208ENST00000449264 PSMG1O95456 288 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 CLPSP04118 112 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 OR12D1P0DN82 309 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 ME2P23368 584 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 DSTNP60981 165 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 GCNT6Q5T4J0 391 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 PPP1R32Q7Z5V6 425 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 SERPINA11Q86U17 422 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 SLC44A2Q8IWA5 706 aaPredicted RBP13.61□□□□□ -0.23
TNF-208ENST00000449264 OR7G1Q8NGA0 311 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 C16orf52Q8NHV5 167 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 ZNF721Q8TF20 911 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 RAB8BQ92930 207 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 MAL2Q969L2 176 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 ZNF583Q96ND8 569 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 NUDT9Q9BW91 350 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 ACTRT3Q9BYD9 372 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 MMADHCQ9H3L0 296 aaPredicted RBP13.61□□□□□ -0.23
TNF-208ENST00000449264 FOLH1BQ9HBA9 442 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 CD300AQ9UGN4 299 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 EGFL7Q9UHF1 273 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 SLC7A8Q9UHI5 535 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 WASF3Q9UPY6 502 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 DTX4Q9Y2E6 619 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 HEMK1Q9Y5R4 338 aaPredicted RBP13.61□□□□□ -0.23
TNF-208ENST00000449264 GMEB1Q9Y692 573 aa13.61□□□□□ -0.23
TNF-208ENST00000449264 LOC102723996A0A087X1L8 192 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 CFAP73A6NFT4 308 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 FAM220BPB1ANY3 271 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 HMGN4O00479 90 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 SOCS6O14544 535 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 DNAJA2O60884 412 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 IGKV3-11P04433 115 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 ACP2P11117 423 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 COX6A1P12074 109 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 HSD17B1P14061 328 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 LIFP15018 202 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 EMDP50402 254 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 ANXA11P50995 505 aaKnown RBP13.6□□□□□ -0.23
TNF-208ENST00000449264 SLC37A1P57057 533 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 SSPNQ14714 243 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 PCOLCEQ15113 449 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 NNATQ16517 81 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 CDC73Q6P1J9 531 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 KIRREL2Q6UWL6 708 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 CALHM3Q86XJ0 350 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 ZNF615Q8N8J6 731 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 MORN4Q8NDC4 146 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 B3GNT7Q8NFL0 401 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 OR11G2Q8NGC1 345 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 OR1N1Q8NGS0 311 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 ADAMTS15Q8TE58 950 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 NAF1Q96HR8 494 aaKnown RBP13.6□□□□□ -0.23
TNF-208ENST00000449264 OR7D2Q96RA2 312 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 GAL3ST4Q96RP7 486 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 PCDHAC1Q9H158 963 aa13.6□□□□□ -0.23
TNF-208ENST00000449264 IGHV1-45A0A0A0MS14 117 aa13.59□□□□□ -0.23
TNF-208ENST00000449264 PCDH17O14917 1159 aa13.59□□□□□ -0.23
TNF-208ENST00000449264 TNFRSF21O75509 655 aa13.59□□□□□ -0.23
TNF-208ENST00000449264 CIB2O75838 187 aa13.59□□□□□ -0.23
TNF-208ENST00000449264 GZMMP51124 257 aa13.59□□□□□ -0.23
TNF-208ENST00000449264 SLC26A5P58743 744 aa13.59□□□□□ -0.23
TNF-208ENST00000449264 ZNHIT3Q15649 155 aaPredicted RBP13.59□□□□□ -0.23
TNF-208ENST00000449264 DUSP5Q16690 384 aa13.59□□□□□ -0.23
TNF-208ENST00000449264 PGM2L1Q6PCE3 622 aa13.59□□□□□ -0.23
TNF-208ENST00000449264 PTOV1Q86YD1 416 aa13.59□□□□□ -0.23
TNF-208ENST00000449264 RAB43Q86YS6 212 aa13.59□□□□□ -0.23
TNF-208ENST00000449264 ZZZ3Q8IYH5 903 aa13.59□□□□□ -0.23
TNF-208ENST00000449264 LGI4Q8N135 537 aa13.59□□□□□ -0.23
TNF-208ENST00000449264 CDRT4Q8N9R6 151 aa13.59□□□□□ -0.23
TNF-208ENST00000449264 SLC16A11Q8NCK7 471 aa13.59□□□□□ -0.23
TNF-208ENST00000449264 XAGE5Q8WWM1 108 aa13.59□□□□□ -0.23
TNF-208ENST00000449264 REXO5Q96IC2 774 aaKnown RBP13.59□□□□□ -0.23
TNF-208ENST00000449264 ITPAQ9BY32 194 aa13.59□□□□□ -0.23
TNF-208ENST00000449264 SUCOQ9UBS9 1254 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms