RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 SLC26A5P58743 744 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 TXNL4AP83876 142 aaKnown RBP13.07□□□□□ -0.32
SHMT2-203ENST00000449049 SPATS1Q496A3 300 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 COX20Q5RI15 118 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.07□□□□□ -0.32
SHMT2-203ENST00000449049 ZCCHC12Q6PEW1 402 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 ANGPTL8Q6UXH0 198 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 KIF2BQ8N4N8 673 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 OR11G2Q8NGC1 345 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 NUDT9Q9BW91 350 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 SEMA4CQ9C0C4 833 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 ADA2Q9NZK5 511 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 BCAP29Q9UHQ4 241 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 CNOT1A5YKK6 2376 aaKnown RBP13.07□□□□□ -0.32
SHMT2-203ENST00000449049 PCSK5Q92824 1860 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 SEC24DO94855 1032 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-203ENST00000449049 BMP2P12643 396 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 MAN2A2P49641 1150 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 PRIM2P49643 509 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 GZMMP51124 257 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 RPS26P62854 115 aaKnown RBP13.07□□□□□ -0.32
SHMT2-203ENST00000449049 LASP1Q14847 261 aaKnown RBP13.07□□□□□ -0.32
SHMT2-203ENST00000449049 PIGGQ5H8A4 983 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 SAMD4BQ5PRF9 694 aaKnown RBP13.07□□□□□ -0.32
SHMT2-203ENST00000449049 SERPINA11Q86U17 422 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 CALHM3Q86XJ0 350 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 RAB43Q86YS6 212 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 APCDD1LQ8NCL9 501 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 FGF11Q92914 225 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 NCLNQ969V3 563 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 C16orf58Q96GQ5 468 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 THTPAQ9BU02 230 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 ACTRT3Q9BYD9 372 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 EQTNQ9NQ60 294 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 DKK4Q9UBT3 224 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 CD300AQ9UGN4 299 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 HEMK1Q9Y5R4 338 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-203ENST00000449049 KNTC1P50748 2209 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 PRORSD1PA6NEY8 169 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 DNAJA2O60884 412 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 MATN1P21941 496 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 MAP3K8P41279 467 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 KHKP50053 298 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 CASP9P55211 416 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 LIPEQ05469 1076 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 CDC73Q6P1J9 531 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 RNF111Q6ZNA4 994 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 NDUFAF7Q7L592 441 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 NET1Q7Z628 596 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-203ENST00000449049 MRGPREQ86SM8 312 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 LGI4Q8N135 537 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 HORMAD2Q8N7B1 307 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 CDRT4Q8N9R6 151 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 OR10A6Q8NH74 314 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 C16orf52Q8NHV5 167 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 SNIP1Q8TAD8 396 aaKnown RBP13.06□□□□□ -0.32
SHMT2-203ENST00000449049 VMP1Q96GC9 406 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 VPS50Q96JG6 964 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 IMMP1LQ96LU5 166 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 VSTM2LQ96N03 204 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 ZNF583Q96ND8 569 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 ECSITQ9BQ95 431 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 SPATA9Q9BWV2 254 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 OR51I1Q9H343 314 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 MMADHCQ9H3L0 296 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-203ENST00000449049 FOLH1BQ9HBA9 442 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 COPS7AQ9UBW8 275 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 PRODH2Q9UF12 536 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 FAF1Q9UNN5 650 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-203ENST00000449049 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.06□□□□□ -0.32
SHMT2-203ENST00000449049 OR6C76A6NM76 312 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 ASNA1O43681 348 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 NME6O75414 186 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-203ENST00000449049 TNFRSF21O75509 655 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 ETFAP13804 333 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 HSD17B1P14061 328 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 PGM1P36871 562 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 CRATP43155 626 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 CEACAM7Q14002 265 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 EXT1Q16394 746 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 PGM2L1Q6PCE3 622 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 VASH2Q86V25 355 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 MCUR1Q96AQ8 359 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 LMF2Q9BU23 707 aaKnown RBP13.06□□□□□ -0.32
SHMT2-203ENST00000449049 ALG2Q9H553 416 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 GIN1Q9NXP7 522 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 ZNF223Q9UK11 482 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-203ENST00000449049 PACSIN3Q9UKS6 424 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 CFL2Q9Y281 166 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 DTX4Q9Y2E6 619 aa13.06□□□□□ -0.32
SHMT2-203ENST00000449049 FAM220BPB1ANY3 271 aa13.05□□□□□ -0.32
SHMT2-203ENST00000449049 HMGN4O00479 90 aa13.05□□□□□ -0.32
SHMT2-203ENST00000449049 TLX3O43711 291 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-203ENST00000449049 HPP00738 406 aa13.05□□□□□ -0.32
SHMT2-203ENST00000449049 ACP2P11117 423 aa13.05□□□□□ -0.32
SHMT2-203ENST00000449049 GSK3BP49841 420 aa13.05□□□□□ -0.32
SHMT2-203ENST00000449049 ZNF155Q12901 538 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-203ENST00000449049 PLAG1Q6DJT9 500 aa13.05□□□□□ -0.32
SHMT2-203ENST00000449049 TNFAIP8L2Q6P589 184 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-203ENST00000449049 C9orf40Q8IXQ3 194 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms