RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 DERL2Q9GZP9 239 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 ADNPQ9H2P0 1102 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 EFCAB1Q9HAE3 211 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 CHMP1AQ9HD42 196 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 KLHL42Q9P2K6 505 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 BLOC1S6Q9UL45 172 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 TRAF6Q9Y4K3 522 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 TRBC2A0A5B9 178 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 H7C0S8 307 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 PF4V1P10720 104 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 GRIA1P42261 906 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZFP36L2P47974 494 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 FRG1Q14331 258 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 TGFBIQ15582 683 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZNF630Q2M218 657 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 METRNLQ641Q3 311 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 MAMSTRQ6ZN01 415 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 TESCQ96BS2 214 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 COQ10AQ96MF6 247 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 PKP4Q99569 1192 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 C1QTNF6Q9BXI9 259 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 NOP53Q9NZM5 478 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 FBXL4Q9UKA2 621 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 DLGAP4Q9Y2H0 992 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 ADAMTSL1Q8N6G6 1762 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 HSPB2A8KAH6 182 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 HAT1O14929 419 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 DLGAP3O95886 979 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 LYNP07948 512 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 HOXC4P09017 264 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 LINC00032P0C843 101 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 IFNGR1P15260 489 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 PDHA2P29803 388 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 CRISP3P54108 245 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 PFN3P60673 137 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 ACTR3P61158 418 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 DCAF7P61962 342 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 NCF4Q15080 339 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 HSPB2Q16082 182 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 REP15Q6BDI9 236 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 MAMDC2Q7Z304 686 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 PRR22Q8IZ63 422 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 BANPQ8N9N5 519 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 PMM1Q92871 262 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 BORCS8Q96FH0 119 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 IMPAD1Q9NX62 359 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 STOX2Q9P2F5 926 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 ADAMTS9Q9P2N4 1935 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 DPPA5A6NC42 116 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 PRORSD1PA6NEY8 169 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 K7ESF4 209 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 AQP7O14520 342 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 SURF4O15260 269 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 CTSLP07711 333 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 C7P10643 843 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 FCGR2AP12318 317 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 LIPJQ5W064 366 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 SLC25A25Q6KCM7 469 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 NLRC3Q7RTR2 1065 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 CUZD1Q86UP6 607 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 NT5C3BQ969T7 300 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 LRRC58Q96CX6 371 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 DCLRE1CQ96SD1 692 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 PDCD10Q9BUL8 212 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 FNDC11Q9BVV2 318 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 CADM1Q9BY67 442 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 PLEKHB1Q9UF11 243 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 BRCA1P38398 1863 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 A0A1B0GUL6 1792 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 FAM58BPP0C7Q3 252 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 ST6GAL1P15907 406 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 NELFEP18615 380 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 SLC1A6P48664 564 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 COPAP53621 1224 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 IKZF1Q13422 519 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 CAMK2DQ13557 499 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 MELKQ14680 651 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR8B8Q15620 311 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 BCL7AQ4VC05 210 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 RAB6CQ53S08 254 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 HENMT1Q5T8I9 393 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZCCHC12Q6PEW1 402 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 C16orf89Q6UX73 402 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 FAM220AQ7Z4H9 259 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 EXOC3L1Q86VI1 746 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR4N5Q8IXE1 308 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 SMYD1Q8NB12 490 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 BBS1Q8NFJ9 593 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR2L5Q8NG80 312 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 WDR60Q8WVS4 1066 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 PIGTQ969N2 578 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 C8orf44Q96CB5 159 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 MRGPRX3Q96LB0 322 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 PHOX2BQ99453 314 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 RACGAP1Q9H0H5 632 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 RAB6CQ9H0N0 254 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 THAP1Q9NVV9 213 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 RHBDL2Q9NX52 303 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 RABL2AQ9UBK7 228 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms