RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 G6PDP11413 515 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 BCKDHAP12694 445 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 HNRNPFP52597 415 aaKnown RBP12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 MAPK12P53778 367 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 RAB38P57729 211 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 ERVK-8P63133 956 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 EMX2Q04743 252 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 SLC13A2Q13183 592 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 PTGR1Q14914 329 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 CMPK2Q5EBM0 449 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 C18orf63Q68DL7 685 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 MRM1Q6IN84 353 aaKnown RBP12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 OGFOD2Q6N063 350 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 CYP20A1Q6UW02 462 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 NCCRP1Q6ZVX7 275 aaPredicted RBP12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 MDGA2Q7Z553 956 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 PIGWQ7Z7B1 504 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 CD163Q86VB7 1156 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 ZCCHC7Q8N3Z6 543 aaKnown RBP12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 FAM47BQ8NA70 645 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 TMEM52Q8NDY8 209 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 SRFBP1Q8NEF9 429 aaKnown RBP12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 CEP70Q8NHQ1 597 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 RND1Q92730 232 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 DAZLQ92904 295 aaKnown RBP12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 GFM2Q969S9 779 aaKnown RBP12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 NCLNQ969V3 563 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 TM4SF18Q96CE8 201 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 ADAP2Q9NPF8 381 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 AIG1Q9NVV5 245 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 HPF1Q9NWY4 346 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 SIRT5Q9NXA8 310 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 KCMF1Q9P0J7 381 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 HEY2Q9UBP5 337 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 MCM8Q9UJA3 840 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 ERVK-11Q9UQG0 969 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 ATG4BQ9Y4P1 393 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 ASB4Q9Y574 426 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 CLCA3PQ9Y6N3 262 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 HCFC1P51610 2035 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 EML6Q6ZMW3 1958 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 GLOD5A6NK44 160 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 AKAP10O43572 662 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 CTNSO60931 367 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 IL3P08700 152 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 CHRNB4P30926 498 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 LIM2P55344 173 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 ELAVL1Q15717 326 aaKnown RBP12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 PRSS53Q2L4Q9 553 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 ANKRD26P1Q6NSI1 321 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 GALNT18Q6P9A2 607 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 SPNS3Q6ZMD2 512 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 PAGE2Q7Z2X7 111 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 KRTCAP2Q8N6L1 136 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 OR52N2Q8NGI0 321 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 ASB15Q8WXK1 588 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 SIKE1Q9BRV8 207 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 SLC24A3Q9HC58 644 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 KCNJ16Q9NPI9 418 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 NOP53Q9NZM5 478 aaKnown RBP12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 MYOTQ9UBF9 498 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 ADAM29Q9UKF5 820 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 DAPP1Q9UN19 280 aa12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 EXO1Q9UQ84 846 aaKnown RBP12.71□□□□□ -0.37
PDLIM2-213ENST00000448520 AKAP9Q99996 3911 aa12.71□□□□□ -0.38
PDLIM2-213ENST00000448520 ANKRD17O75179 2603 aaKnown RBP12.71□□□□□ -0.38
PDLIM2-213ENST00000448520 HIVEP1P15822 2718 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 MYOCOSA0A1B0GUC4 107 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 ACOT7O00154 380 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 UBDO15205 165 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 PDE9AO76083 593 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 AIFM1O95831 613 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 IFNA16P05015 189 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 NCF2P19878 526 aaPredicted RBP12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 CPN2P22792 545 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 RFC3P40938 356 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 ARFIP1P53367 373 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 KRTAP10-9P60411 292 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 GPR85P60893 370 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 UFM1P61960 85 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 PPIAP62937 165 aaKnown RBP12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 ZNF763Q0D2J5 394 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 TESK1Q15569 626 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 FAM180BQ6P0A1 224 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 HSDL2Q6YN16 418 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 SPATA19Q7Z5L4 167 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 CDH24Q86UP0 819 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 GPR180Q86V85 440 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 SLC22A16Q86VW1 577 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 HOMEZQ8IX15 550 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 MORN4Q8NDC4 146 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 PSD4Q8NDX1 1056 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 OR5L2Q8NGL0 311 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 OR9I1Q8NGQ6 314 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 OR8K3Q8NH51 312 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 SGCZQ96LD1 299 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 TEX37Q96LM6 180 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 ROGDIQ9GZN7 287 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 DEFB127Q9H1M4 99 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 ZNF385DQ9H6B1 395 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms