RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 KLHL12Q53G59 568 aa17.89■□□□□ 0.45
PMPCB-204ENST00000444457 PLA2G15Q8NCC3 412 aa17.89■□□□□ 0.45
PMPCB-204ENST00000444457 VN1R2Q8NFZ6 395 aa17.89■□□□□ 0.45
PMPCB-204ENST00000444457 OR52P1PQ8NH57 321 aa17.89■□□□□ 0.45
PMPCB-204ENST00000444457 TMEM203Q969S6 136 aa17.89■□□□□ 0.45
PMPCB-204ENST00000444457 EMC7Q9NPA0 242 aa17.89■□□□□ 0.45
PMPCB-204ENST00000444457 MALT1Q9UDY8 824 aa17.89■□□□□ 0.45
PMPCB-204ENST00000444457 A0A0A6YYJ9 748 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 SMIM30A4D0T7 59 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 SERPINI2O75830 405 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 POU1F1P28069 291 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 BMP8BP34820 402 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 IL18Q14116 193 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 C16orf62Q7Z3J2 963 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 BMP8AQ7Z5Y6 402 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 FBXO15Q8NCQ5 510 aaPredicted RBP17.88■□□□□ 0.45
PMPCB-204ENST00000444457 PHF21AQ96BD5 680 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 CXorf40BQ96DE9 158 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 DTD2Q96FN9 168 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 EPHX3Q9H6B9 360 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 NMNAT1Q9HAN9 279 aaPredicted RBP17.88■□□□□ 0.45
PMPCB-204ENST00000444457 SH2B3Q9UQQ2 575 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 NCKAP1Q9Y2A7 1128 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 KPNA3O00505 521 aaPredicted RBP17.88■□□□□ 0.45
PMPCB-204ENST00000444457 STK25O00506 426 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 HPGDSO60760 199 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 GADD45GO95257 159 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 SOD1P00441 154 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 SRPRAP08240 638 aaKnown RBP17.88■□□□□ 0.45
PMPCB-204ENST00000444457 ZNF8P17098 575 aaPredicted RBP17.88■□□□□ 0.45
PMPCB-204ENST00000444457 EVX1P49640 407 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 ZNF763Q0D2J5 394 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 PLK5Q496M5 336 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 GARNL3Q5VVW2 1013 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 ZNF770Q6IQ21 691 aaPredicted RBP17.88■□□□□ 0.45
PMPCB-204ENST00000444457 ARSKQ6UWY0 536 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 USP30Q70CQ3 517 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 LRRC17Q8N6Y2 441 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.88■□□□□ 0.453e-19■■■■□ 24.2
PMPCB-204ENST00000444457 COQ10AQ96MF6 247 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 BHLHE41Q9C0J9 482 aaPredicted RBP17.88■□□□□ 0.45
PMPCB-204ENST00000444457 ERVMER34-1Q9H9K5 563 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 ATP6V1HQ9UI12 483 aa17.88■□□□□ 0.45
PMPCB-204ENST00000444457 TOR1AO14656 332 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 IFNA7P01567 189 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 NPPBP16860 134 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 DGKGP49619 791 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 VASPP50552 380 aaPredicted RBP17.87■□□□□ 0.45
PMPCB-204ENST00000444457 HTRA4P83105 476 aaPredicted RBP17.87■□□□□ 0.45
PMPCB-204ENST00000444457 LRRC74AQ0VAA2 488 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 TSTA3Q13630 321 aaPredicted RBP17.87■□□□□ 0.45
PMPCB-204ENST00000444457 EXOSC2Q13868 293 aaKnown RBP17.87■□□□□ 0.45
PMPCB-204ENST00000444457 SLBPQ14493 270 aaKnown RBP eCLIP17.87■□□□□ 0.45
PMPCB-204ENST00000444457 TMIGD1Q6UXZ0 262 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 MRPL43Q8N983 215 aaKnown RBP17.87■□□□□ 0.45
PMPCB-204ENST00000444457 SYT14Q8NB59 555 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 OR11H4Q8NGC9 324 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 TSSK6Q9BXA6 273 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 MED28Q9H204 178 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 REEP4Q9H6H4 257 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 WBP1LQ9NX94 342 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 MYO7AQ13402 2215 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 TCF20Q9UGU0 1960 aaKnown RBP17.87■□□□□ 0.45
PMPCB-204ENST00000444457 ZNF197O14709 1029 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 SPINT1O43278 529 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 LILRB5O75023 590 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 METAP1P53582 386 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 MVDP53602 400 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 DHCR24Q15392 516 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 QSOX2Q6ZRP7 698 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 COMMD6Q7Z4G1 85 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 CFAP206Q8IYR0 622 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 OR4K1Q8NGD4 311 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 GEMIN6Q8WXD5 167 aaKnown RBP17.87■□□□□ 0.45
PMPCB-204ENST00000444457 WDR34Q96EX3 536 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 GPATCH2Q9NW75 528 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 YARS2Q9Y2Z4 477 aaKnown RBP17.87■□□□□ 0.45
PMPCB-204ENST00000444457 DYRK1BQ9Y463 629 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 FKBP7Q9Y680 259 aa17.87■□□□□ 0.45
PMPCB-204ENST00000444457 KIAA0100Q14667 2235 aaKnown RBP17.86■□□□□ 0.45
PMPCB-204ENST00000444457 NDUFA2O43678 99 aa17.86■□□□□ 0.45
PMPCB-204ENST00000444457 CISD3P0C7P0 127 aa17.86■□□□□ 0.45
PMPCB-204ENST00000444457 SLC6A1P30531 599 aa17.86■□□□□ 0.45
PMPCB-204ENST00000444457 INPP1P49441 399 aa17.86■□□□□ 0.45
PMPCB-204ENST00000444457 RPS25P62851 125 aaKnown RBP17.86■□□□□ 0.45
PMPCB-204ENST00000444457 HBA1P69905 142 aa17.86■□□□□ 0.45
PMPCB-204ENST00000444457 RBBP4Q09028 425 aa17.86■□□□□ 0.45
PMPCB-204ENST00000444457 C12orf73Q69YU5 71 aa17.86■□□□□ 0.45
PMPCB-204ENST00000444457 ANGPTL8Q6UXH0 198 aa17.86■□□□□ 0.45
PMPCB-204ENST00000444457 ZNF852Q6ZMS4 543 aa17.86■□□□□ 0.45
PMPCB-204ENST00000444457 TRAPPC5Q8IUR0 188 aa17.86■□□□□ 0.45
PMPCB-204ENST00000444457 LMNTD1Q8N9Z9 388 aa17.86■□□□□ 0.45
PMPCB-204ENST00000444457 OR10Z1Q8NGY1 313 aa17.86■□□□□ 0.45
PMPCB-204ENST00000444457 GOT1L1Q8NHS2 421 aaPredicted RBP17.86■□□□□ 0.45
PMPCB-204ENST00000444457 EFCAB11Q9BUY7 163 aa17.86■□□□□ 0.45
PMPCB-204ENST00000444457 OR2AG1Q9H205 316 aa17.86■□□□□ 0.45
PMPCB-204ENST00000444457 DMRT3Q9NQL9 472 aa17.86■□□□□ 0.45
PMPCB-204ENST00000444457 DIMT1Q9UNQ2 313 aaKnown RBP17.86■□□□□ 0.45
PMPCB-204ENST00000444457 SF3B6Q9Y3B4 125 aaKnown RBP17.86■□□□□ 0.45
PMPCB-204ENST00000444457 FOXE1O00358 373 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms