RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 PPCSQ9HAB8 311 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 MCM8Q9UJA3 840 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 MRPS18CQ9Y3D5 142 aaKnown RBP7.13□□□□□ -1.27
CD44-211ENST00000442151 CHCHD2Q9Y6H1 151 aaPredicted RBP7.13□□□□□ -1.27
CD44-211ENST00000442151 A0A0G2JNJ9 132 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 NKX2-6A6NCS4 301 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 CD8B2A6NJW9 211 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 TRIM49D1C9J1S8 452 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 PGRMC2O15173 223 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 ERAL1O75616 437 aaKnown RBP7.13□□□□□ -1.27
CD44-211ENST00000442151 SUPT7LO94864 414 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 RPS17P08708 135 aaKnown RBP7.13□□□□□ -1.27
CD44-211ENST00000442151 CYP4B1P13584 511 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 IMPDH1P20839 514 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 CHMP24386 653 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 ATP5F1P24539 256 aaPredicted RBP7.13□□□□□ -1.27
CD44-211ENST00000442151 HSD17B3P37058 310 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 EEFSECP57772 596 aaKnown RBP7.13□□□□□ -1.27
CD44-211ENST00000442151 CLCQ05315 142 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 DUSP8Q13202 625 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 GAB1Q13480 694 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 TIGD3Q6B0B8 471 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 AAGABQ6PD74 315 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 SPNS3Q6ZMD2 512 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 WDR53Q7Z5U6 358 aaPredicted RBP7.13□□□□□ -1.27
CD44-211ENST00000442151 MARVELD2Q8N4S9 558 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 ZNF615Q8N8J6 731 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 ZNF441Q8N8Z8 693 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 ADCY4Q8NFM4 1077 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 KIF18AQ8NI77 898 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 METTL6Q8TCB7 284 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 ZPLD1Q8TCW7 415 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 RNASE6Q93091 150 aaKnown RBP7.13□□□□□ -1.27
CD44-211ENST00000442151 ABTB1Q969K4 478 aaPredicted RBP7.13□□□□□ -1.27
CD44-211ENST00000442151 METTL2AQ96IZ6 378 aaKnown RBP7.13□□□□□ -1.27
CD44-211ENST00000442151 RILPQ96NA2 401 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 TM9SF2Q99805 663 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 ZNF717Q9BY31 904 aaPredicted RBP7.13□□□□□ -1.27
CD44-211ENST00000442151 UCK2Q9BZX2 261 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 C3orf14Q9HBI5 128 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 SEMA4BQ9NPR2 832 aaPredicted RBP7.13□□□□□ -1.27
CD44-211ENST00000442151 TNFRSF10DQ9UBN6 386 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 Q9UFV3 132 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 CAMK2AQ9UQM7 478 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 C15orf41Q9Y2V0 281 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 HRH3Q9Y5N1 445 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 ESYT3A0FGR9 886 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 SERTM1A2A2V5 107 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 HMX2A2RU54 273 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 LINC01387J3KSC0 135 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 TO15178 435 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 COQ9O75208 318 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 CRCPO75575 148 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 PDYNP01213 254 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 DNASE1P24855 282 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 CTSSP25774 331 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 ABCD3P28288 659 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 SSTR4P31391 388 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 CASP3P42574 277 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 ALDH9A1P49189 494 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 PSMD4P55036 377 aaKnown RBP7.12□□□□□ -1.27
CD44-211ENST00000442151 DIO3P55073 304 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 ACSM2AQ08AH3 577 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 PLCXD2Q0VAA5 305 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 TRAF3Q13114 568 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 TRADDQ15628 312 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 IMPG1Q17R60 797 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 PRICKLE4Q2TBC4 344 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 FBXL19-AS1Q494R0 122 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 FBXW10Q5XX13 1052 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 NSUN5P2Q63ZY6 315 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 ACSM2BQ68CK6 577 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 GPRIN3Q6ZVF9 776 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 COMMD6Q7Z4G1 85 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 CAMKMTQ7Z624 323 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 PLD6Q8N2A8 252 aaKnown RBP7.12□□□□□ -1.27
CD44-211ENST00000442151 RNF175Q8N4F7 328 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 MEIOBQ8N635 442 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 OR52B6Q8NGF0 335 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 FAM76AQ8TAV0 307 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 ADIPOR1Q96A54 375 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 TM4SF18Q96CE8 201 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 KLHL29Q96CT2 875 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 NTNG2Q96CW9 530 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 COL21A1Q96P44 957 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 CDK15Q96Q40 435 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 BBS4Q96RK4 519 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 ZNF382Q96SR6 550 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 PRDM14Q9GZV8 571 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 PIGMQ9H3S5 423 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 ZFAND3Q9H8U3 227 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 DNAJB12Q9NXW2 375 aaKnown RBP7.12□□□□□ -1.27
CD44-211ENST00000442151 TAS2R9Q9NYW1 312 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 EHD3Q9NZN3 535 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 KLRF1Q9NZS2 232 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 SENP1Q9P0U3 644 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 MID2Q9UJV3 735 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 UTS2RQ9UKP6 389 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 GRID1Q9ULK0 1009 aa7.12□□□□□ -1.27
CD44-211ENST00000442151 ITPR2Q14571 2701 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms