RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 TSPAN12O95859 305 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 GLUD1P00367 558 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 TIMP1P01033 207 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 NPPAP01160 153 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 FGF2P09038 288 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 ALPIP09923 528 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 LINGO3P0C6S8 592 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZCCHC18P0CG32 403 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 CHRNB1P11230 501 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 TCN1P20061 433 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 MSH3P20585 1137 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 PRDX3P30048 256 aaKnown RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 HMOX2P30519 316 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 GCH1P30793 250 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 HOXD3P31249 432 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 CD70P32970 193 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 TTKP33981 857 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 SPAM1P38567 509 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 HSPA13P48723 471 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 SLC7A2P52569 658 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 ATXN3P54252 364 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 GAS1P54826 345 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 AQP4P55087 323 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 NME5P56597 212 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 KCNK10P57789 538 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 ERVPABLB-1P60509 514 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 SNRPD1P62314 119 aaKnown RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 DEFB103AP81534 67 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 FOLH1Q04609 750 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 EMX2Q04743 252 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 FOXM1Q08050 763 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 BNIP2Q12982 314 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 GTF2H2Q13888 395 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 GRB7Q14451 532 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 PDK3Q15120 406 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 TGFBIQ15582 683 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 CHRNA6Q15825 494 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 CDKN3Q16667 212 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 MYLK3Q32MK0 819 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 GPR33Q49SQ1 333 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 VPS26BQ4G0F5 336 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 FBXO43Q4G163 708 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 CARD16Q5EG05 197 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 FBXO48Q5FWF7 155 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 XKR7Q5GH72 579 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 C6orf136Q5SQH8 315 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 IRAK1BP1Q5VVH5 260 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 IL23RQ5VWK5 629 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 GPR139Q6DWJ6 353 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 OR52E8Q6IFG1 317 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 SULT1C3Q6IMI6 304 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 GTF2H2CQ6P1K8 395 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 METTL2BQ6P1Q9 378 aaKnown RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 C8orf82Q6P1X6 216 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 FAM151BQ6UXP7 276 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 FAM83HQ6ZRV2 1179 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 TPGS1Q6ZTW0 290 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 GPRIN3Q6ZVF9 776 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 RRM2BQ7LG56 351 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 MDGA2Q7Z553 956 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 TMCO2Q7Z6W1 182 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 DHFR2Q86XF0 187 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 KLBQ86Z14 1044 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 GALNT13Q8IUC8 556 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 LINC00346Q8IVM7 164 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 BBS7Q8IWZ6 715 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 ST13P4Q8IZP2 240 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 ELMOD1Q8N336 334 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 CHCHD4Q8N4Q1 142 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 MINDY1Q8N5J2 469 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 DPP10Q8N608 796 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZBTB2Q8N680 514 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 SNX31Q8N9S9 440 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 OR2AP1Q8NGE2 309 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 OR9I1Q8NGQ6 314 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 WFDC5Q8TCV5 224 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 ASB5Q8WWX0 329 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 ESAMQ96AP7 390 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 MIB2Q96AX9 1013 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 EME1Q96AY2 570 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 ISG20Q96AZ6 181 aaKnown RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 ULK4Q96C45 1275 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 LRRC58Q96CX6 371 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 MSI2Q96DH6 328 aaKnown RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 SPDL1Q96EA4 605 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 DCUN1D1Q96GG9 259 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 CNDP2Q96KP4 475 aaKnown RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 CMTM3Q96MX0 182 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 KCNA7Q96RP8 456 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 LYSMD1Q96S90 227 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF382Q96SR6 550 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 EGFL8Q99944 293 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 PKP2Q99959 881 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 GPATCH1Q9BRR8 931 aaKnown RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 TM6SF2Q9BZW4 377 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 TRIM15Q9C019 465 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 FAM192AQ9GZU8 254 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZBP1Q9H171 429 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 TUBB1Q9H4B7 451 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 SLC32A1Q9H598 525 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms