RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 ASMTP46597 345 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 XKP51811 444 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 RAE1P78406 368 aaKnown RBP8.1□□□□□ -1.11
HPS4-206ENST00000439453 ARF5P84085 180 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 CHRNA6Q15825 494 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 AANATQ16613 207 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 OCLNQ16625 522 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 CRB2Q5IJ48 1285 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 QSOX2Q6ZRP7 698 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 HDDC2Q7Z4H3 204 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 CAMKMTQ7Z624 323 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 LRRC17Q8N6Y2 441 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 IL17RCQ8NAC3 791 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 OR52N2Q8NGI0 321 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 HUS1BQ8NHY5 278 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 LHFPL5Q8TAF8 219 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.1□□□□□ -1.112e-7■■■□□ 19.1
HPS4-206ENST00000439453 SKA2Q8WVK7 121 aaPredicted RBP8.1□□□□□ -1.11
HPS4-206ENST00000439453 HIST1H2AHQ96KK5 128 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 TM9SF2Q99805 663 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 HIST1H2AJQ99878 128 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 SLC35A5Q9BS91 424 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 H2AFJQ9BTM1 129 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 SLC12A9Q9BXP2 914 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 MED28Q9H204 178 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 HEXA-AS1Q9H8Q6 139 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 ZFYVE1Q9HBF4 777 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 SCN8AQ9UQD0 1980 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 PLXND1Q9Y4D7 1925 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 CKAP5Q14008 2032 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.09□□□□□ -1.11
HPS4-206ENST00000439453 A8MUA0 341 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 RNASET2O00584 256 aaKnown RBP8.09□□□□□ -1.11
HPS4-206ENST00000439453 CASKO14936 926 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 SH3BGRLO75368 114 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 IFNW1P05000 195 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 IRF8Q02556 426 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 EEF1A2Q05639 463 aaKnown RBP8.09□□□□□ -1.11
HPS4-206ENST00000439453 ZNF177Q13360 481 aaPredicted RBP8.09□□□□□ -1.11
HPS4-206ENST00000439453 SNTA1Q13424 505 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 RNF219Q5W0B1 726 aaPredicted RBP8.09□□□□□ -1.11
HPS4-206ENST00000439453 BICRALQ6AI39 1079 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 PLEKHM3Q6ZWE6 761 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 HTR3DQ70Z44 454 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 TRILQ7L0X0 811 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 C12orf40Q86WS4 652 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 SDR16C5Q8N3Y7 309 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 ZNF366Q8N895 744 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 UCN3Q969E3 161 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 PKP4Q99569 1192 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 ATF6BQ99941 703 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 KCNN2Q9H2S1 579 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 RANBP3Q9H6Z4 567 aaPredicted RBP8.09□□□□□ -1.11
HPS4-206ENST00000439453 ZFP64Q9NPA5 681 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 SPATA6Q9NWH7 488 aaPredicted RBP8.09□□□□□ -1.11
HPS4-206ENST00000439453 CFAP97Q9P2B7 532 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 LHX3Q9UBR4 397 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 RAB23Q9ULC3 237 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 SF3B6Q9Y3B4 125 aaKnown RBP8.09□□□□□ -1.11
HPS4-206ENST00000439453 GLYATL1P3A0A0U1RQE8 302 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 GTPBP1O00178 669 aaKnown RBP8.09□□□□□ -1.11
HPS4-206ENST00000439453 FFAR1O14842 300 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 PSIP1O75475 530 aaKnown RBP8.09□□□□□ -1.11
HPS4-206ENST00000439453 CLDN11O75508 207 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 CD160O95971 181 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 RECKO95980 971 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 BPIP17213 487 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 CD22P20273 847 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 HNMTP50135 292 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 HBA1P69905 142 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 RIN1Q13671 783 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 LRRC32Q14392 662 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 MLF2Q15773 248 aaPredicted RBP8.09□□□□□ -1.11
HPS4-206ENST00000439453 ATXN7L2Q5T6C5 722 aaPredicted RBP8.09□□□□□ -1.11
HPS4-206ENST00000439453 ARMC12Q5T9G4 340 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 FAM92BQ6ZTR7 304 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 TMEM105Q8N8V8 129 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 PLA2G15Q8NCC3 412 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 OR4K1Q8NGD4 311 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 WDR20Q8TBZ3 569 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 C11orf24Q96F05 449 aaPredicted RBP8.09□□□□□ -1.11
HPS4-206ENST00000439453 MYO19Q96H55 970 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 LRFN3Q9BTN0 628 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 ATG10Q9H0Y0 220 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 TMEM38AQ9H6F2 299 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 LIN7BQ9HAP6 207 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 C1GALT1Q9NS00 363 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 KCND3Q9UK17 655 aa8.09□□□□□ -1.11
HPS4-206ENST00000439453 MGAT4DA6NG13 374 aa8.09□□□□□ -1.12
HPS4-206ENST00000439453 AKAP8O43823 692 aaKnown RBP8.09□□□□□ -1.12
HPS4-206ENST00000439453 IL32P24001 234 aa8.09□□□□□ -1.12
HPS4-206ENST00000439453 AVPR1BP47901 424 aa8.09□□□□□ -1.12
HPS4-206ENST00000439453 SGSHP51688 502 aa8.09□□□□□ -1.12
HPS4-206ENST00000439453 CTBP2P56545 445 aa8.09□□□□□ -1.12
HPS4-206ENST00000439453 WNT4P56705 351 aa8.09□□□□□ -1.12
HPS4-206ENST00000439453 FABP5Q01469 135 aa8.09□□□□□ -1.12
HPS4-206ENST00000439453 GALEQ14376 348 aa8.09□□□□□ -1.12
HPS4-206ENST00000439453 SEC23BQ15437 767 aa8.09□□□□□ -1.12
HPS4-206ENST00000439453 COL28A1Q2UY09 1125 aa8.09□□□□□ -1.12
HPS4-206ENST00000439453 ZNF385BQ569K4 471 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms