RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 C10orf62Q5T681 223 aaPredicted RBP8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 TMEM198Q66K66 360 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 TMEM211Q6ICI0 200 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 ABHD17CQ6PCB6 329 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 PAOXQ6QHF9 649 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 IL20RBQ6UXL0 311 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 HSDL2Q6YN16 418 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 LARP4Q71RC2 724 aaKnown RBP eCLIP8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 MTDHQ86UE4 582 aaKnown RBP8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 LINC00528Q8N1L1 170 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 ARMC10Q8N2F6 343 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 OR2L5Q8NG80 312 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 OR52N2Q8NGI0 321 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 STON2Q8WXE9 905 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 CMTM7Q96FZ5 175 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 MARK4Q96L34 752 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 PPP3R2Q96LZ3 170 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 QRFPRQ96P65 431 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 F2RL3Q96RI0 385 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 SERINC2Q96SA4 455 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 CSF3RQ99062 836 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 SPOCK3Q9BQ16 436 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 ALOXE3Q9BYJ1 711 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 OR8D2Q9GZM6 311 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 OR51B5Q9H339 312 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 LRTM1Q9HBL6 345 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 ADAP2Q9NPF8 381 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 DMRT3Q9NQL9 472 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 NMRK1Q9NWW6 199 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 C1orf109Q9NX04 203 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 VPS29Q9UBQ0 182 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 ZNF223Q9UK11 482 aaPredicted RBP8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 TSC22D4Q9Y3Q8 395 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 MED13LQ71F56 2210 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 FAM90A27PA6NNH2 459 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 NPIPA2E9PIF3 369 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 NPIPA3F8WFD2 350 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 CYR61O00622 381 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 UBDO15205 165 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 RSL1D1O76021 490 aaKnown RBP8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 OR6B1O95007 311 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 BMP2P12643 396 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 SOX3P41225 446 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 GPR143P51810 404 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 RPL38P63173 70 aaKnown RBP8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 ID2Q02363 134 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 ZNF750Q32MQ0 723 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 RFTN2Q52LD8 501 aaPredicted RBP8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 DEPDC1Q5TB30 811 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 ARHGAP11AQ6P4F7 1023 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 CHSY3Q70JA7 882 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 SPATA19Q7Z5L4 167 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 CCDC71Q8IV32 467 aaPredicted RBP8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 GPALPP1Q8IXQ4 340 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 FNDC5Q8NAU1 212 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 ZFP62Q8NB50 900 aaPredicted RBP8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 PSD4Q8NDX1 1056 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 OR14A16Q8NHC5 309 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 C16orf52Q8NHV5 167 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 ASB5Q8WWX0 329 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 RND1Q92730 232 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 DAZLQ92904 295 aaKnown RBP8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 APIPQ96GX9 242 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 SERPINI1Q99574 410 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 C1orf50Q9BV19 199 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 MS4A8Q9BY19 250 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 MRPL1Q9BYD6 325 aaKnown RBP8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 TP63Q9H3D4 680 aaPredicted RBP8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 DEPPQ9NTK1 212 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 PGPEP1Q9NXJ5 209 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 DAPP1Q9UN19 280 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 PPIEQ9UNP9 301 aaKnown RBP8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 TRIM33Q9UPN9 1127 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 HRH3Q9Y5N1 445 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 ITPR3Q14573 2671 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 ABCA4P78363 2273 aa8.51□□□□□ -1.05
AC011228.1-201ENST00000439027 A0A0G2JMM0 328 aa8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 A0A1W2PPB8 328 aa8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 A0A1W2PRS3 328 aa8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 PINLYPA6NC86 204 aa8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 NKX2-6A6NCS4 301 aa8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 SYNDIG1LA6NDD5 238 aa8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 KIR3DP1A8MWS1 328 aa8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 C17orf105B2RV13 164 aa8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 ACOT7O00154 380 aa8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 RTCAO00442 366 aaKnown RBP8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 RRP9O43818 475 aaKnown RBP8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 CCDC22O60826 627 aa8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 LDB3O75112 727 aa8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 DCTN3O75935 186 aa8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 TBX6O95947 436 aaPredicted RBP8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 ALDOCP09972 364 aaKnown RBP8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 CAPN3P20807 821 aa8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 CHRNB4P30926 498 aa8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 NR0B1P51843 470 aaKnown RBP8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 RAP1GDS1P52306 607 aa8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 ERVK-8P63133 956 aa8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 EMX2Q04743 252 aa8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 ACSM2AQ08AH3 577 aa8.5□□□□□ -1.05
AC011228.1-201ENST00000439027 PMPCAQ10713 525 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms