RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 A0A1B0GTQ1 180 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 MTMR11A4FU01 709 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 A6NCN8 305 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 NEMP2A6NFY4 417 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 HAS3O00219 553 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 CTDSP2O14595 271 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 SURF4O15260 269 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 OGTO15294 1046 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 NVLO15381 856 aaKnown RBP2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 ATP1B1P05026 303 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 HMOX1P09601 288 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 DANCRP0C864 163 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 PCP11498 1178 aaKnown RBP2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 TRIM21P19474 475 aaKnown RBP2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 HNRNPH3P31942 346 aaKnown RBP2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 UGT1A5P35504 534 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 KHKP50053 298 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 ATP4BP51164 291 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 ALDH3A2P51648 485 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 SMSP52788 366 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 GEMIN4P57678 1058 aaKnown RBP2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 DCAF7P61962 342 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 FKBP3Q00688 224 aaKnown RBP2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 TRIM29Q14134 588 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 FZD2Q14332 565 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 ZNF146Q15072 292 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 GPR33Q49SQ1 333 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 IGSF11Q5DX21 431 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 ATP1A1-AS1Q5TC04 95 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 RSBN1Q5VWQ0 802 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 RNLSQ5VYX0 342 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 DMKNQ6E0U4 476 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 TMEM211Q6ICI0 200 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 REG3GQ6UW15 175 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 FCRLAQ7L513 359 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 NUP54Q7Z3B4 507 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 NDUFAF2Q8N183 169 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 GPATCH11Q8N954 259 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 OR4K1Q8NGD4 311 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 OR52B6Q8NGF0 335 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 OR10Q1Q8NGQ4 319 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 PNPLA2Q96AD5 504 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 UBAC1Q9BSL1 405 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 ZMYND12Q9H0C1 365 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 TMEM161AQ9NX61 479 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 PISDQ9UG56 409 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 BAIAP2L1Q9UHR4 511 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 FBXO2Q9UK22 296 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 CHKBQ9Y259 395 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 DNAH7Q8WXX0 4024 aa2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 MACF1Q9UPN3 7388 aaKnown RBP2.1□□□□□ -2.07
HMGB1P18-201ENST00000438801 FAT2Q9NYQ8 4349 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 LOC102723996A0A087X1L8 192 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 GPR75-ASB3A0A0A6YYF3 556 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 IGHV3-38A0A0C4DH36 116 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 TMEM89A2RUT3 159 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 SRRM4A7MD48 611 aaKnown RBP2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 TRAFD1O14545 582 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 VILLO15195 856 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 DPM1O60762 260 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 ZBED4O75132 1171 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 PTP4A3O75365 173 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 CTAG2O75638 210 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 SMIM10L2AP0DMW4 78 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 SMIM10L2BP0DMW5 78 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 FDPSP14324 419 aaKnown RBP2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 MPZP25189 248 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 BTDP43251 543 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 RXRGP48443 463 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 MAPK12P53778 367 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 ARF3P61204 181 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 ARF1P84077 181 aaKnown RBP2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 EIF4EBP2Q13542 120 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 MCMDC2Q4G0Z9 681 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 OLFML2AQ68BL7 652 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 MFSD12Q6NUT3 480 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 TMEM64Q6YI46 380 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 SLC24A5Q71RS6 500 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 CATSPER3Q86XQ3 398 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 ZNF595Q8IYB9 648 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 GUF1Q8N442 669 aaKnown RBP2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 LIX1Q8N485 282 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 OR4D10Q8NGI6 311 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 SAP25Q8TEE9 199 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 LPGAT1Q92604 370 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 B3GALT6Q96L58 329 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 MAK16Q9BXY0 300 aaKnown RBP2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 SH3BGRL2Q9UJC5 107 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 PRDM4Q9UKN5 801 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 ELF5Q9UKW6 265 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 PLCL2Q9UPR0 1127 aa2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 DYNC1H1Q14204 4646 aaKnown RBP2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 HUWE1Q7Z6Z7 4374 aaKnown RBP2.09□□□□□ -2.07
HMGB1P18-201ENST00000438801 NAV1Q8NEY1 1877 aa2.09□□□□□ -2.08
HMGB1P18-201ENST00000438801 TRPM6Q9BX84 2022 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 COL27A1Q8IZC6 1860 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 LOC100509620A0A075B734 347 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 ANKRD18BA2A2Z9 1011 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 SGK1O00141 431 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms