RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 IL21RQ9HBE5 538 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 EQTNQ9NQ60 294 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 MGAT4BQ9UQ53 548 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 RNF6Q9Y252 685 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 KCNE3Q9Y6H6 103 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 TRBV4-1A0A0J9YWV2 114 aa24.1■■□□□ 1.45
CPNE1-216ENST00000437340 K7ESF4 209 aa24.1■■□□□ 1.45
CPNE1-216ENST00000437340 DNAJB6O75190 326 aa24.1■■□□□ 1.45
CPNE1-216ENST00000437340 UBXN7O94888 489 aa24.1■■□□□ 1.45
CPNE1-216ENST00000437340 GASTP01350 101 aa24.1■■□□□ 1.45
CPNE1-216ENST00000437340 ST6GAL1P15907 406 aa24.1■■□□□ 1.45
CPNE1-216ENST00000437340 CXCL12P48061 93 aa24.1■■□□□ 1.45
CPNE1-216ENST00000437340 TMBIM6P55061 237 aa24.1■■□□□ 1.45
CPNE1-216ENST00000437340 VSX2P58304 361 aaPredicted RBP24.1■■□□□ 1.45
CPNE1-216ENST00000437340 SIGLEC14Q08ET2 396 aa24.1■■□□□ 1.45
CPNE1-216ENST00000437340 DYNC1I2Q13409 638 aaKnown RBP24.1■■□□□ 1.45
CPNE1-216ENST00000437340 MLIPQ5VWP3 458 aa24.1■■□□□ 1.45
CPNE1-216ENST00000437340 RBM45Q8IUH3 476 aaKnown RBP24.1■■□□□ 1.45
CPNE1-216ENST00000437340 C19orf47Q8N9M1 422 aaKnown RBP24.1■■□□□ 1.45
CPNE1-216ENST00000437340 APH1BQ8WW43 257 aa24.1■■□□□ 1.45
CPNE1-216ENST00000437340 TANKQ92844 425 aa24.1■■□□□ 1.45
CPNE1-216ENST00000437340 COL26A1Q96A83 441 aa24.1■■□□□ 1.45
CPNE1-216ENST00000437340 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.1■■□□□ 1.45
CPNE1-216ENST00000437340 LHPPQ9H008 270 aa24.1■■□□□ 1.45
CPNE1-216ENST00000437340 SLC38A1Q9H2H9 487 aa24.1■■□□□ 1.45
CPNE1-216ENST00000437340 A4GNTQ9UNA3 340 aa24.1■■□□□ 1.45
CPNE1-216ENST00000437340 SCN3AQ9NY46 2000 aa24.09■■□□□ 1.45
CPNE1-216ENST00000437340 A0A1W2PRQ8 180 aa24.09■■□□□ 1.45
CPNE1-216ENST00000437340 LILRA5A6NI73 299 aa24.09■■□□□ 1.45
CPNE1-216ENST00000437340 CYR61O00622 381 aa24.09■■□□□ 1.45
CPNE1-216ENST00000437340 FUT4P22083 530 aa24.09■■□□□ 1.45
CPNE1-216ENST00000437340 OLR1P78380 273 aa24.09■■□□□ 1.45
CPNE1-216ENST00000437340 DGCR6Q14129 220 aa24.09■■□□□ 1.45
CPNE1-216ENST00000437340 NPTX1Q15818 432 aa24.09■■□□□ 1.45
CPNE1-216ENST00000437340 FAM214AQ32MH5 1076 aa24.09■■□□□ 1.45
CPNE1-216ENST00000437340 FGD3Q5JSP0 725 aa24.09■■□□□ 1.45
CPNE1-216ENST00000437340 LACC1Q8IV20 430 aa24.09■■□□□ 1.45
CPNE1-216ENST00000437340 P3H2Q8IVL5 708 aa24.09■■□□□ 1.45
CPNE1-216ENST00000437340 ARL14Q8N4G2 192 aa24.09■■□□□ 1.45
CPNE1-216ENST00000437340 RHOXF1Q8NHV9 184 aa24.09■■□□□ 1.45
CPNE1-216ENST00000437340 FUZQ9BT04 418 aa24.09■■□□□ 1.45
CPNE1-216ENST00000437340 RASSF1Q9NS23 344 aa24.09■■□□□ 1.45
CPNE1-216ENST00000437340 PLCXD1Q9NUJ7 323 aa24.09■■□□□ 1.45
CPNE1-216ENST00000437340 TECTAO75443 2155 aa24.09■■□□□ 1.45
CPNE1-216ENST00000437340 ZNF860A6NHJ4 632 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 TRIM64BA6NI03 449 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 NOL3O60936 208 aaKnown RBP24.08■■□□□ 1.45
CPNE1-216ENST00000437340 ATP1B1P05026 303 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 CDH3P22223 829 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 KRT20P35900 424 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 MAZP56270 477 aaKnown RBP24.08■■□□□ 1.45
CPNE1-216ENST00000437340 PIGFQ07326 219 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 ZNF628Q5EBL2 1059 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 FAM111BQ6SJ93 734 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 PRSS41Q7RTY9 318 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 C16orf62Q7Z3J2 963 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 OR4N5Q8IXE1 308 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 CA13Q8N1Q1 262 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 LINC00471Q8N535 108 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 DEFB119Q8N690 84 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 ZNF540Q8NDQ6 660 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 FAM81AQ8TBF8 368 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 NR4A3Q92570 626 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 GTPBP3Q969Y2 492 aaKnown RBP24.08■■□□□ 1.45
CPNE1-216ENST00000437340 WFDC6Q9BQY6 131 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 SLC24A3Q9HC58 644 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 DOLKQ9UPQ8 538 aa24.08■■□□□ 1.45
CPNE1-216ENST00000437340 H3BMQ9 156 aa24.08■■□□□ 1.44
CPNE1-216ENST00000437340 FAM20BO75063 409 aa24.08■■□□□ 1.44
CPNE1-216ENST00000437340 UGT2B17O75795 530 aa24.08■■□□□ 1.44
CPNE1-216ENST00000437340 GPR75O95800 540 aa24.08■■□□□ 1.44
CPNE1-216ENST00000437340 EPPINO95925 133 aa24.08■■□□□ 1.44
CPNE1-216ENST00000437340 C6orf132Q5T0Z8 1188 aa24.08■■□□□ 1.44
CPNE1-216ENST00000437340 KLHL17Q6TDP4 642 aa24.08■■□□□ 1.44
CPNE1-216ENST00000437340 Q6ZPB1 254 aaPredicted RBP24.08■■□□□ 1.44
CPNE1-216ENST00000437340 COMTD1Q86VU5 262 aa24.08■■□□□ 1.44
CPNE1-216ENST00000437340 SDR16C5Q8N3Y7 309 aa24.08■■□□□ 1.44
CPNE1-216ENST00000437340 LMX1AQ8TE12 382 aa24.08■■□□□ 1.44
CPNE1-216ENST00000437340 UBE2FQ969M7 185 aa24.08■■□□□ 1.44
CPNE1-216ENST00000437340 SLC35A4Q96G79 324 aa24.08■■□□□ 1.44
CPNE1-216ENST00000437340 COG8Q96MW5 612 aa24.08■■□□□ 1.44
CPNE1-216ENST00000437340 CCDC90BQ9GZT6 254 aa24.08■■□□□ 1.44
CPNE1-216ENST00000437340 TRIM45Q9H8W5 580 aaPredicted RBP24.08■■□□□ 1.44
CPNE1-216ENST00000437340 ANKRA2Q9H9E1 313 aa24.08■■□□□ 1.44
CPNE1-216ENST00000437340 FAM60AQ9NP50 221 aa24.08■■□□□ 1.44
CPNE1-216ENST00000437340 TMEM74BQ9NUR3 256 aa24.08■■□□□ 1.44
CPNE1-216ENST00000437340 AASSQ9UDR5 926 aa24.08■■□□□ 1.44
CPNE1-216ENST00000437340 C19orf53Q9UNZ5 99 aaPredicted RBP24.08■■□□□ 1.44
CPNE1-216ENST00000437340 CACNA1IQ9P0X4 2223 aa24.07■■□□□ 1.44
CPNE1-216ENST00000437340 A0A087WV62 115 aa24.07■■□□□ 1.44
CPNE1-216ENST00000437340 M0R3H8 397 aa24.07■■□□□ 1.44
CPNE1-216ENST00000437340 RGS10O43665 173 aa24.07■■□□□ 1.44
CPNE1-216ENST00000437340 SRPX2O60687 465 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-216ENST00000437340 ALPPP05187 535 aa24.07■■□□□ 1.44
CPNE1-216ENST00000437340 CAPZBP47756 277 aa24.07■■□□□ 1.44
CPNE1-216ENST00000437340 HPCAP84074 193 aa24.07■■□□□ 1.44
CPNE1-216ENST00000437340 MVKQ03426 396 aa24.07■■□□□ 1.44
CPNE1-216ENST00000437340 EMX1Q04741 257 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-216ENST00000437340 OLIG3Q7RTU3 272 aa24.07■■□□□ 1.44
CPNE1-216ENST00000437340 PRSS48Q7RTY5 328 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms