RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 SLCO3A1Q9UIG8 710 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 ZNF888P0CJ79 500 aaPredicted RBP15.09■□□□□ 0.01
PTPN13-204ENST00000436978 HK3P52790 923 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 C1orf61Q13536 156 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 CARTPTQ16568 116 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 OR52N2Q8NGI0 321 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 OR2T4Q8NH00 348 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 APOOQ9BUR5 198 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 DNTTIP1Q9H147 329 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 FXYD6-FXYD2A0A087WZ82 144 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 PRKYO43930 277 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 CES4AQ5XG92 561 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 LYSMD4Q5XG99 296 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 SAMD12Q8N8I0 201 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 IL17RCQ8NAC3 791 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 OR8J1Q8NGP2 316 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 OR8K5Q8NH50 307 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 HAPLN2Q9GZV7 340 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 FXYD6Q9H0Q3 95 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 OR6C70A6NIJ9 312 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 GGT2P36268 569 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 ENDOVQ8N8Q3 282 aaKnown RBP15.09■□□□□ 0.01
PTPN13-204ENST00000436978 TMEM40Q8WWA1 233 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 MYADMQ96S97 322 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 LOC100509620A0A075B734 347 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 WASH4PA8MWX3 477 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 H7C417 338 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 C1orf220Q5T0J3 134 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 KLF16Q9BXK1 252 aaPredicted RBP15.09■□□□□ 0.01
PTPN13-204ENST00000436978 ACTR6Q9GZN1 396 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 H3BSH0 61 aa15.08■□□□□ 0.01
PTPN13-204ENST00000436978 MOGQ16653 247 aa15.08■□□□□ 0.01
PTPN13-204ENST00000436978 BORAQ6PGQ7 559 aa15.08■□□□□ 0.01
PTPN13-204ENST00000436978 COMMD6Q7Z4G1 85 aa15.08■□□□□ 0.01
PTPN13-204ENST00000436978 NKX1-2Q9UD57 310 aaPredicted RBP15.08■□□□□ 0.01
PTPN13-204ENST00000436978 SRPK3Q9UPE1 567 aa15.08■□□□□ 0.01
PTPN13-204ENST00000436978 TSPAN33Q86UF1 283 aa15.08■□□□□ 0.01
PTPN13-204ENST00000436978 TM9SF4Q92544 642 aa15.08■□□□□ 0.01
PTPN13-204ENST00000436978 RDH14Q9HBH5 336 aa15.08■□□□□ 0.01
PTPN13-204ENST00000436978 RP2O75695 350 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 RBMXP38159 391 aaKnown RBP15.08■□□□□ 0
PTPN13-204ENST00000436978 AKR1D1P51857 326 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 PSMA6P60900 246 aaKnown RBP15.08■□□□□ 0
PTPN13-204ENST00000436978 LIPKQ5VXJ0 399 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 OR8S1Q8NH09 359 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 GGT3PA6NGU5 568 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 DNAJB6O75190 326 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 GTF2F2P13984 249 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 PRKACGP22612 351 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 CRISP1P54107 249 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 FOXRED2Q8IWF2 684 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 SLC41A3Q96GZ6 507 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 FAM46AQ96IP4 442 aaKnown RBP15.08■□□□□ 0
PTPN13-204ENST00000436978 ZNF701Q9NV72 531 aaPredicted RBP15.08■□□□□ 0
PTPN13-204ENST00000436978 NUFIP1Q9UHK0 495 aaKnown RBP15.08■□□□□ 0
PTPN13-204ENST00000436978 TRAPPC13A5PLN9 417 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 RNASET2O00584 256 aaKnown RBP15.08■□□□□ 0
PTPN13-204ENST00000436978 MAGEA12P43365 314 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 NKAPLQ5M9Q1 402 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 KCTD9Q7L273 389 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 OR14L1PQ8NHC6 308 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 IL17FQ96PD4 163 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 SPO11Q9Y5K1 396 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 GGT1P19440 569 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 AMY2BP19961 511 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 CSNK1DP48730 415 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 FGL1Q08830 312 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 RSU1Q15404 277 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 CEACAM19Q7Z692 300 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 TMEM173Q86WV6 379 aaPredicted RBP15.08■□□□□ 0
PTPN13-204ENST00000436978 SLC39A11Q8N1S5 342 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 SECISBP2Q96T21 854 aaKnown RBP15.08■□□□□ 0
PTPN13-204ENST00000436978 KLHL42Q9P2K6 505 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 RREB1Q92766 1687 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 DIRAS3O95661 229 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 KDELR2P33947 212 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 CD83Q01151 205 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 CLEC1AQ8NC01 280 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 CLEC4EQ9ULY5 219 aa15.08■□□□□ 0
PTPN13-204ENST00000436978 A6NIZ1 184 aa15.07■□□□□ 0
PTPN13-204ENST00000436978 VNN2O95498 520 aa15.07■□□□□ 0
PTPN13-204ENST00000436978 ELK4P28324 431 aa15.07■□□□□ 0
PTPN13-204ENST00000436978 RAP1BP61224 184 aa15.07■□□□□ 0
PTPN13-204ENST00000436978 RAP1AP62834 184 aa15.07■□□□□ 0
PTPN13-204ENST00000436978 SLC7A9P82251 487 aa15.07■□□□□ 0
PTPN13-204ENST00000436978 HNRNPA1L2Q32P51 320 aaKnown RBP15.07■□□□□ 0
PTPN13-204ENST00000436978 HMBOX1Q6NT76 420 aa15.07■□□□□ 0
PTPN13-204ENST00000436978 LMAN1LQ9HAT1 526 aa15.07■□□□□ 0
PTPN13-204ENST00000436978 MLXQ9UH92 298 aa15.07■□□□□ 0
PTPN13-204ENST00000436978 RAB12Q6IQ22 244 aa15.07■□□□□ 0
PTPN13-204ENST00000436978 XKRXQ6PP77 449 aa15.07■□□□□ 0
PTPN13-204ENST00000436978 PARPBPQ9NWS1 579 aa15.07■□□□□ 0
PTPN13-204ENST00000436978 SLC35A3Q9Y2D2 325 aa15.07■□□□□ 0
PTPN13-204ENST00000436978 KCNK5O95279 499 aa15.07■□□□□ 0
PTPN13-204ENST00000436978 PITX1P78337 314 aaPredicted RBP15.07■□□□□ 0
PTPN13-204ENST00000436978 NPRL3Q12980 569 aa15.07■□□□□ 0
PTPN13-204ENST00000436978 PIGGQ5H8A4 983 aa15.07■□□□□ 0
PTPN13-204ENST00000436978 LARP4Q71RC2 724 aaKnown RBP eCLIP15.07■□□□□ 0
PTPN13-204ENST00000436978 TPTEP56180 551 aa15.07■□□□□ 0
PTPN13-204ENST00000436978 SLC22A16Q86VW1 577 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms