RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 SSTR4P31391 388 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 SOX11P35716 441 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 FLOT2Q14254 428 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 SFT2D3Q587I9 215 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 CDC73Q6P1J9 531 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 LGI4Q8N135 537 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 SENP5Q96HI0 755 aaPredicted RBP21.43■■□□□ 1.02
CPSF4-204ENST00000436336 DENND2DQ9H6A0 471 aaPredicted RBP21.43■■□□□ 1.02
CPSF4-204ENST00000436336 ASCL3Q9NQ33 180 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 ACTR3BQ9P1U1 418 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 SNX13Q9Y5W8 968 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 DUXAA6NLW8 204 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 GSTA4O15217 222 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 IGHEP01854 428 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 UMODP07911 640 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 GGT1P19440 569 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 STAT5AP42229 794 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 MAN2A2P49641 1150 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 RPS15P62841 145 aaKnown RBP21.43■■□□□ 1.02
CPSF4-204ENST00000436336 DUSP8Q13202 625 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 DHFR2Q86XF0 187 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 PROSER1Q86XN7 944 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 CDRT4Q8N9R6 151 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 C11orf65Q8NCR3 313 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 MORN4Q8NDC4 146 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 OR5D16Q8NGK9 328 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 SLC2A12Q8TD20 617 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 OR7D2Q96RA2 312 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 YIPF4Q9BSR8 244 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 OR10A5Q9H207 317 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 FARSAQ9Y285 508 aaKnown RBP21.43■■□□□ 1.02
CPSF4-204ENST00000436336 C21orf140B9A014 251 aa21.42■■□□□ 1.02
CPSF4-204ENST00000436336 ARPC2O15144 300 aa21.42■■□□□ 1.02
CPSF4-204ENST00000436336 DXOO77932 396 aaKnown RBP21.42■■□□□ 1.02
CPSF4-204ENST00000436336 DDAH2O95865 285 aa21.42■■□□□ 1.02
CPSF4-204ENST00000436336 OR12D1P0DN82 309 aa21.42■■□□□ 1.02
CPSF4-204ENST00000436336 ARAFP10398 606 aa21.42■■□□□ 1.02
CPSF4-204ENST00000436336 CAMK2BQ13554 666 aa21.42■■□□□ 1.02
CPSF4-204ENST00000436336 VEZF1Q14119 521 aa21.42■■□□□ 1.02
CPSF4-204ENST00000436336 ZNF630Q2M218 657 aaPredicted RBP21.42■■□□□ 1.02
CPSF4-204ENST00000436336 EXOSC6Q5RKV6 272 aaKnown RBP21.42■■□□□ 1.02
CPSF4-204ENST00000436336 GLYATQ6IB77 296 aa21.42■■□□□ 1.02
CPSF4-204ENST00000436336 CPEB2Q7Z5Q1 589 aaKnown RBP21.42■■□□□ 1.02
CPSF4-204ENST00000436336 ZNF615Q8N8J6 731 aa21.42■■□□□ 1.02
CPSF4-204ENST00000436336 ADAMTS15Q8TE58 950 aa21.42■■□□□ 1.02
CPSF4-204ENST00000436336 JADE3Q92613 823 aa21.42■■□□□ 1.02
CPSF4-204ENST00000436336 RAB8BQ92930 207 aa21.42■■□□□ 1.02
CPSF4-204ENST00000436336 TCFL5Q9UL49 500 aa21.42■■□□□ 1.02
CPSF4-204ENST00000436336 A8MUI8 341 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 GMNNO75496 209 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 AGR2O95994 175 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 CLPSP04118 112 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 IGKV3-11P04433 115 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 PCGF2P35227 344 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 EMDP50402 254 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 ACTR3P61158 418 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 ELF3P78545 371 aaPredicted RBP21.41■■□□□ 1.02
CPSF4-204ENST00000436336 KPNB1Q14974 876 aaKnown RBP21.41■■□□□ 1.02
CPSF4-204ENST00000436336 LCN8Q6JVE9 175 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 ZNF721Q8TF20 911 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 MAL2Q969L2 176 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 GPR87Q9BY21 358 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 OR8D2Q9GZM6 311 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 A4GALTQ9NPC4 353 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 PRODH2Q9UF12 536 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 HEMK1Q9Y5R4 338 aaPredicted RBP21.41■■□□□ 1.02
CPSF4-204ENST00000436336 LOC102723996A0A087X1L8 192 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 SAGE2PA6NJ88 616 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 CXCR6O00574 342 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 NME6O75414 186 aaPredicted RBP21.41■■□□□ 1.02
CPSF4-204ENST00000436336 NCK1P16333 377 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 DNASE1L3Q13609 305 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 RTP5Q14D33 572 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 FAM69BQ5VUD6 431 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 SLC30A8Q8IWU4 369 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 SLC16A11Q8NCK7 471 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 OR1N1Q8NGS0 311 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 FBXO30Q8TB52 745 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 XAGE5Q8WWM1 108 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 FIG4Q92562 907 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 HOXB13Q92826 284 aaPredicted RBP21.41■■□□□ 1.02
CPSF4-204ENST00000436336 LPAR4Q99677 370 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 FOLH1BQ9HBA9 442 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 GIN1Q9NXP7 522 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 P2RX2Q9UBL9 471 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 CFL2Q9Y281 166 aa21.41■■□□□ 1.02
CPSF4-204ENST00000436336 IGHV3-20A0A0C4DH32 117 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 TMEM247A6NEH6 219 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 SOX30O94993 753 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 ALOX5P09917 674 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 ACP2P11117 423 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 DLSTP36957 453 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 MAP3K8P41279 467 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 SLC37A1P57057 533 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 CDK6Q00534 326 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 EEF1A2Q05639 463 aaKnown RBP21.4■■□□□ 1.02
CPSF4-204ENST00000436336 ZNF155Q12901 538 aaPredicted RBP21.4■■□□□ 1.02
CPSF4-204ENST00000436336 SCARB2Q14108 478 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 PAPD4Q6PIY7 484 aaKnown RBP21.4■■□□□ 1.02
CPSF4-204ENST00000436336 RNF111Q6ZNA4 994 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms