RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 OPRL1P41146 370 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 LSSP48449 732 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 UGT2B15P54855 530 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 VBP1P61758 197 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 NCS1P62166 190 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 ST3GAL4Q11206 333 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 WDR53Q7Z5U6 358 aaPredicted RBP13.1□□□□□ -0.31
HOXC4-202ENST00000430889 OR13H1Q8NG92 308 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 OR7G2Q8NG99 324 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 C9orf43Q8TAL5 461 aaPredicted RBP13.1□□□□□ -0.31
HOXC4-202ENST00000430889 RSC1A1Q92681 617 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 RPL3LQ92901 407 aaKnown RBP13.1□□□□□ -0.31
HOXC4-202ENST00000430889 SH3YL1Q96HL8 342 aaPredicted RBP13.1□□□□□ -0.31
HOXC4-202ENST00000430889 ANKRA2Q9H9E1 313 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 C3orf14Q9HBI5 128 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 TMEM74BQ9NUR3 256 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 PHF11Q9UIL8 331 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 LIPT1Q9Y234 373 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 TLR4O00206 839 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 OR10H3O60404 316 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 DNAJB6O75190 326 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 UGT2B17O75795 530 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 GLULP15104 373 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 POLR2CP19387 275 aaPredicted RBP13.09□□□□□ -0.31
HOXC4-202ENST00000430889 MMP11P24347 488 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 UGT2B10P36537 528 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 CCR5P51681 352 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 C21orf59P57076 290 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 EIF2B5Q13144 721 aaKnown RBP13.09□□□□□ -0.31
HOXC4-202ENST00000430889 SUZ12Q15022 739 aaKnown RBP13.09□□□□□ -0.31
HOXC4-202ENST00000430889 TIGD6Q17RP2 521 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 MFSD12Q6NUT3 480 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 C1orf94Q6P1W5 598 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 C19orf48Q6RUI8 117 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 FAM111BQ6SJ93 734 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 RNF44Q7L0R7 432 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 ZER1Q7Z7L7 766 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 ZBTB46Q86UZ6 589 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 OR2L13Q8N349 312 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 LINC00471Q8N535 108 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 ZNF675Q8TD23 568 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 KAT2AQ92830 837 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 LGALS12Q96DT0 336 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 SLC35A4Q96G79 324 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 CRELD1Q96HD1 420 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 SLC6A18Q96N87 628 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 ACTRT3Q9BYD9 372 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 SLIRPQ9GZT3 109 aaKnown RBP13.09□□□□□ -0.31
HOXC4-202ENST00000430889 FBXO8Q9NRD0 319 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 POT1Q9NUX5 634 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 TBC1D23Q9NUY8 699 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 ETAA1Q9NY74 926 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 OSGIN1Q9UJX0 560 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 DAPP1Q9UN19 280 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 B3GNT3Q9Y2A9 372 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 PCDHGA3Q9Y5H0 932 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 SLC22A7Q9Y694 548 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 ZNF780BQ9Y6R6 833 aa13.09□□□□□ -0.31
HOXC4-202ENST00000430889 LOC105369274A0A096LPK9 316 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 LOC102723532A0A0G2JNH3 316 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 OR6C74A6NCV1 312 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 TPST2O60704 377 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 ALDH4A1P30038 563 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 GRK5P34947 590 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 IDUAP35475 653 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 BUD31P41223 144 aaPredicted RBP13.08□□□□□ -0.31
HOXC4-202ENST00000430889 RABIFP47224 123 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 XKP51811 444 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 EFNB1P98172 346 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 CHRNEQ04844 493 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 COX10Q12887 443 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 DOC2BQ14184 412 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 NDUFA9Q16795 377 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 ENTPD8Q5MY95 495 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 SLC25A30Q5SVS4 291 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 FHL5Q5TD97 284 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 CDC73Q6P1J9 531 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 PTCHD4Q6ZW05 846 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 USP53Q70EK8 1073 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 SLCO6A1Q86UG4 719 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 SAMD14Q8IZD0 417 aaPredicted RBP13.08□□□□□ -0.31
HOXC4-202ENST00000430889 OR4N4Q8N0Y3 316 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 LRRC25Q8N386 305 aaPredicted RBP13.08□□□□□ -0.31
HOXC4-202ENST00000430889 MFSD4AQ8N468 514 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 OR4K5Q8NGD3 323 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 BAHD1Q8TBE0 780 aaPredicted RBP13.08□□□□□ -0.31
HOXC4-202ENST00000430889 PATE1Q8WXA2 126 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 DIO2Q92813 273 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 ZG16BQ96DA0 208 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 GPA33Q99795 319 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 FNDC11Q9BVV2 318 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 QRSL1Q9H0R6 528 aaKnown RBP13.08□□□□□ -0.31
HOXC4-202ENST00000430889 POLR2J3Q9H1A7 115 aaKnown RBP13.08□□□□□ -0.31
HOXC4-202ENST00000430889 TCEAL2Q9H3H9 227 aaPredicted RBP13.08□□□□□ -0.31
HOXC4-202ENST00000430889 IL21RQ9HBE5 538 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 LYRM4Q9HD34 91 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 C11orf16Q9NQ32 467 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 CLN6Q9NWW5 311 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 CALML5Q9NZT1 146 aa13.08□□□□□ -0.31
HOXC4-202ENST00000430889 ENTPD2Q9Y5L3 495 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms