RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 ERCC6LQ2NKX8 1250 aa13.91□□□□□ -0.18
PHF1-204ENST00000427826 TRMT12Q53H54 448 aaKnown RBP13.91□□□□□ -0.18
PHF1-204ENST00000427826 TRIM46Q7Z4K8 759 aa13.91□□□□□ -0.18
PHF1-204ENST00000427826 SRRM1Q8IYB3 904 aaKnown RBP13.91□□□□□ -0.18
PHF1-204ENST00000427826 OR52R1Q8NGF1 315 aa13.91□□□□□ -0.18
PHF1-204ENST00000427826 NEIL3Q8TAT5 605 aa13.91□□□□□ -0.18
PHF1-204ENST00000427826 C11orf24Q96F05 449 aaPredicted RBP13.91□□□□□ -0.18
PHF1-204ENST00000427826 METTL2AQ96IZ6 378 aaKnown RBP13.91□□□□□ -0.18
PHF1-204ENST00000427826 RILPQ96NA2 401 aa13.91□□□□□ -0.18
PHF1-204ENST00000427826 KCNA7Q96RP8 456 aa13.91□□□□□ -0.18
PHF1-204ENST00000427826 ITPAQ9BY32 194 aa13.91□□□□□ -0.18
PHF1-204ENST00000427826 KCNJ16Q9NPI9 418 aa13.91□□□□□ -0.18
PHF1-204ENST00000427826 RRAGDQ9NQL2 400 aaPredicted RBP13.91□□□□□ -0.18
PHF1-204ENST00000427826 SLC35C2Q9NQQ7 365 aa13.91□□□□□ -0.18
PHF1-204ENST00000427826 PLLPQ9Y342 182 aa13.91□□□□□ -0.18
PHF1-204ENST00000427826 CREBBPQ92793 2442 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 FOXO6A8MYZ6 492 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 C19orf84I3L1E1 186 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 TO15178 435 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 LRATO95237 230 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 UROSP10746 265 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 PCSK2P16519 638 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 DDCP20711 480 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 ELAVL4P26378 380 aaKnown RBP13.9□□□□□ -0.18
PHF1-204ENST00000427826 SSTR2P30874 369 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 KIR3DL1P43629 444 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 EMDP50402 254 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 NUP107P57740 925 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 ZNF763Q0D2J5 394 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 PLCXD2Q0VAA5 305 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 SNTA1Q13424 505 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 ZNF628Q5EBL2 1059 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 LIPMQ5VYY2 423 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 TMEM81Q6P7N7 255 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 SCIMPQ6UWF3 145 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 PRR22Q8IZ63 422 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 OR10Q1Q8NGQ4 319 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 EPS8L3Q8TE67 593 aaKnown RBP13.9□□□□□ -0.18
PHF1-204ENST00000427826 EXOSC8Q96B26 276 aaKnown RBP13.9□□□□□ -0.18
PHF1-204ENST00000427826 TMEM41AQ96HV5 264 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 TTYH2Q9BSA4 534 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 IQCGQ9H095 443 aaKnown RBP13.9□□□□□ -0.18
PHF1-204ENST00000427826 STMN4Q9H169 189 aaPredicted RBP13.9□□□□□ -0.18
PHF1-204ENST00000427826 METTL7AQ9H8H3 244 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 ANKZF1Q9H8Y5 726 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 ALKBH4Q9NXW9 302 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 DTX4Q9Y2E6 619 aa13.9□□□□□ -0.18
PHF1-204ENST00000427826 ZNF407Q9C0G0 2248 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 FRG2CA6NGY1 282 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 TRAPPC6AO75865 159 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 GLI4P10075 376 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 FOXA1P55317 472 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 MRPS35P82673 323 aaKnown RBP13.89□□□□□ -0.19
PHF1-204ENST00000427826 DUSP2Q05923 314 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 SLC18A2Q05940 514 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 C2orf80Q0P641 193 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 DUSP8Q13202 625 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 SF3B4Q15427 424 aaKnown RBP eCLIP13.89□□□□□ -0.195e-10■■□□□ 12.9
PHF1-204ENST00000427826 LTB4RQ15722 352 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 CEBPEQ15744 281 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 C1orf185Q5T7R7 199 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 FAM219BQ5XKK7 198 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 TIGD3Q6B0B8 471 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 SLC30A6Q6NXT4 461 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 FAM180BQ6P0A1 224 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 FAM9CQ8IZT9 166 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 RIBC1Q8N443 379 aaPredicted RBP13.89□□□□□ -0.19
PHF1-204ENST00000427826 RPRMLQ8N4K4 120 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 TMCO6Q96DC7 493 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 OMA1Q96E52 524 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 BBS4Q96RK4 519 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 TRMOQ9BU70 441 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 EBPLQ9BY08 206 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 ENKD1Q9H0I2 346 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 SENP1Q9P0U3 644 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 SPRR3Q9UBC9 169 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 TNFRSF10DQ9UBN6 386 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 GPR55Q9Y2T6 319 aaPredicted RBP13.89□□□□□ -0.19
PHF1-204ENST00000427826 C15orf41Q9Y2V0 281 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 MYO9AB2RTY4 2548 aa13.89□□□□□ -0.19
PHF1-204ENST00000427826 C15orf38-AP3S2A0A0A6YYH1 394 aa13.88□□□□□ -0.19
PHF1-204ENST00000427826 TLDC2A0PJX2 215 aa13.88□□□□□ -0.19
PHF1-204ENST00000427826 AHRRA9YTQ3 701 aa13.88□□□□□ -0.19
PHF1-204ENST00000427826 SLC28A1O00337 649 aa13.88□□□□□ -0.19
PHF1-204ENST00000427826 PLOD3O60568 738 aa13.88□□□□□ -0.19
PHF1-204ENST00000427826 RSL1D1O76021 490 aaKnown RBP13.88□□□□□ -0.19
PHF1-204ENST00000427826 SLITRK5O94991 958 aa13.88□□□□□ -0.19
PHF1-204ENST00000427826 HPNP05981 417 aa13.88□□□□□ -0.19
PHF1-204ENST00000427826 ENDOUP21128 410 aaKnown RBP13.88□□□□□ -0.19
PHF1-204ENST00000427826 SOX18P35713 384 aa13.88□□□□□ -0.19
PHF1-204ENST00000427826 ZFP36L2P47974 494 aaKnown RBP13.88□□□□□ -0.19
PHF1-204ENST00000427826 TRPC1P48995 793 aa13.88□□□□□ -0.19
PHF1-204ENST00000427826 CDK9P50750 372 aaKnown RBP13.88□□□□□ -0.19
PHF1-204ENST00000427826 NNATQ16517 81 aa13.88□□□□□ -0.19
PHF1-204ENST00000427826 BICRALQ6AI39 1079 aa13.88□□□□□ -0.19
PHF1-204ENST00000427826 MEX3BQ6ZN04 569 aaKnown RBP13.88□□□□□ -0.19
PHF1-204ENST00000427826 IKBIPQ70UQ0 350 aa13.88□□□□□ -0.19
PHF1-204ENST00000427826 LURAP1LQ8IV03 231 aa13.88□□□□□ -0.19
PHF1-204ENST00000427826 CCDC71Q8IV32 467 aaPredicted RBP13.88□□□□□ -0.19
PHF1-204ENST00000427826 PM20D2Q8IYS1 436 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms