RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 P2RY13Q9BPV8 354 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 SAMD10Q9BYL1 202 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 BLACEA4D250 179 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 CRYZL1O95825 349 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 UBXN2BQ14CS0 331 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 OR8K3Q8NH51 312 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 SAMD11Q96NU1 681 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 NT5DC2Q9H857 520 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 A0A1W2PS29 197 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 SYPP08247 313 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 AKAIN1P0CW23 69 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 TNFSF4P23510 183 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 SLC25A11Q02978 314 aaKnown RBP13.79□□□□□ -0.2
PTPN13-203ENST00000427191 SFT2D3Q587I9 215 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 C6orf136Q5SQH8 315 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 LBX2Q6XYB7 198 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 Q9Y3F1 56 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 CDHR4A6H8M9 788 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 PRAMEF11O60813 436 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 CPT2P23786 658 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 PYCR1P32322 319 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 SLC6A8P48029 635 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 DBPQ10586 325 aaPredicted RBP13.78□□□□□ -0.2
PTPN13-203ENST00000427191 SGCAQ16586 387 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 AGAP7PQ5VUJ5 663 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 AGAP6Q5VW22 663 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 ANKK1Q8NFD2 765 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 AGAP4Q96P64 663 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 PITX2Q99697 317 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 TCEAL2Q9H3H9 227 aaPredicted RBP13.78□□□□□ -0.2
PTPN13-203ENST00000427191 ASF1BQ9NVP2 202 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 TMEM59LQ9UK28 342 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 A0A0A6YYH2 397 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 A6NJ64 397 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 FBLP22087 321 aaKnown RBP13.78□□□□□ -0.2
PTPN13-203ENST00000427191 DAP3P51398 398 aaKnown RBP13.78□□□□□ -0.2
PTPN13-203ENST00000427191 DLX2Q07687 328 aaPredicted RBP13.78□□□□□ -0.2
PTPN13-203ENST00000427191 CMIPQ8IY22 773 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 MYLIPQ8WY64 445 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 BCO2Q9BYV7 579 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 PIGVQ9NUD9 493 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 TCEAL1Q15170 157 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 ZC3H14Q6PJT7 736 aaKnown RBP13.78□□□□□ -0.2
PTPN13-203ENST00000427191 ZFAND1Q8TCF1 268 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 C3orf49Q96BT1 292 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 KLRG1Q96E93 195 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 LRR1Q96L50 414 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 TMEM131LA2VDJ0 1609 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 A8MUA0 341 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 SMAD9O15198 467 aaKnown RBP13.78□□□□□ -0.2
PTPN13-203ENST00000427191 TGM5O43548 720 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 ASGR2P07307 311 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 CRABP1P29762 137 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 FUT2Q10981 343 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 KEAP1Q14145 624 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 ACTBL2Q562R1 376 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 SLC35F1Q5T1Q4 408 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 PPP2R2DQ66LE6 453 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 GALNT10Q86SR1 603 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 INSL6Q9Y581 213 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 ZNF705FA8MVS1 300 aaPredicted RBP13.78□□□□□ -0.2
PTPN13-203ENST00000427191 ZNF705DP0CH99 300 aaPredicted RBP13.78□□□□□ -0.2
PTPN13-203ENST00000427191 ZNF705BP0CI00 300 aaPredicted RBP13.78□□□□□ -0.2
PTPN13-203ENST00000427191 PTH2RP49190 550 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 OR4E2Q8NGC2 313 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 FRZBQ92765 325 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 ZBED3Q96IU2 234 aaPredicted RBP13.78□□□□□ -0.2
PTPN13-203ENST00000427191 OIP5O43482 229 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 HTR3AP46098 478 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 DCUN1D4Q92564 292 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 CAPNS2Q96L46 248 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 ATRNL1Q5VV63 1379 aa13.78□□□□□ -0.2
PTPN13-203ENST00000427191 ZNF736B4DX44 427 aaPredicted RBP13.77□□□□□ -0.2
PTPN13-203ENST00000427191 SLC1A7O00341 560 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 RETP07949 1114 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 MRPL3P09001 348 aaKnown RBP13.77□□□□□ -0.2
PTPN13-203ENST00000427191 DGKEP52429 567 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 ZNF136P52737 540 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 UBE2NP61088 152 aaKnown RBP13.77□□□□□ -0.2
PTPN13-203ENST00000427191 LCN8Q6JVE9 175 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 KCTD20Q7Z5Y7 419 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 TRAPPC6BQ86SZ2 158 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 TMEM150AQ86TG1 271 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 IQCF1Q8N6M8 205 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 OR52P1PQ8NH57 321 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 EMID1Q96A84 441 aaPredicted RBP13.77□□□□□ -0.2
PTPN13-203ENST00000427191 DZANK1Q9NVP4 752 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 HS3ST4Q9Y661 456 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 C10orf71Q711Q0 1435 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 DUX1O43812 170 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 GABRA3P34903 492 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 SOX2P48431 317 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 SPOCK1Q08629 439 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 MSMO1Q15800 293 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 TREML2Q5T2D2 321 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 SLC22A25Q6T423 547 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 RIPK3Q9Y572 518 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 PXDNQ92626 1479 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 PFKMP08237 780 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 PBX2P40425 430 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms